Salvia splendens (scarlet sage): 121759312
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Entry
121759312 CDS
T07627
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
121759312
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sspl04040
]
121759312
Ion channels [BR:
sspl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
121759312
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Motif
Pfam:
Ion_trans
cNMP_binding
Cupin_3
Motif
Other DBs
NCBI-GeneID:
121759312
NCBI-ProteinID:
XP_042010782
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Position
12:29143612..29149543
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AA seq
771 aa
AA seq
DB search
MDASSRDEAPMLPASHLQSDNGVSSARTGISGRTRSVSMSFATESPHPSEYQQNLVGLTG
PLRAVKRNPQVQMSGPLHPNRNNEVVFRPPQTAAEPENRARNGDGDYVGKNEHLWRSGQL
GKCSDPYCTACPMFYDAKGQQKPSRTTAMIDAKYHNMLYGDAQSWAKRMSSRFLSYIPGV
INPHAKLVQWWNKFFVIFCIVASFLDPFFFFLLFVRKDYKCVELIMPKTREFLILRTITD
CVYFMHILLQFRLAYVAPETRVAGSGDLVDDPKKIAWNYFTTYFPVDLLVVLPMPQIILI
FVLPHSASSPGNEIIKFVLPSAILVQYIPRLSRFLPLVAGFSPTGFIFESAWANFLMNLL
TYILASHVVGSCWYLLSIQRVNKCLENACDGNKTSNCTTLISCSHNYEQRFADIPDWIDW
KNNENASACFTKDGFDFGICEAAVNLTTHKEIFDRYLYSLFWGFQQISTLAGNQEPSYMP
LEVIFTMFIIGIGLLLFALLIGNMQNFLQALGRRRLEKSLRGRDVEQWMSHRRLPKNLRR
QVRAAERFNWSATRGVNEDTLIENLPEDLQREIRRHLFKFVKKVRIFQLLDEPVIDAIQE
KLKTRSYIRNTKILYPGGLVDKIVFIIRGEMKSTGEDGNDSILSEGDVCGEELLTWCLEH
SSVSQDGKSIRLPRHGLLSDRHVTCLTNVEAFVLRAADFEEVAGLFTRFLKNPLVQGAIR
YDSPHWRGIAARRIQLAWRHRRKQTNRVDSSQVGSSRSPHNLSYRTRSRRK
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttcatcgagagatgaagcacctatgctgccagcttcacatttacagtccgat
aatggcgtctcctctgcaagaacagggatttctggtaggacgaggagtgtgtcaatgtct
tttgctacggagtctccacatccatccgaataccagcaaaatctagttggtttaactggc
cctttgagggctgtgaagcgaaatcctcaagtacagatgagtggtccattacatcctaac
cggaacaacgaggtcgtctttaggcctcctcagacagctgctgagcctgagaatcgggcc
aggaatggtgatggggactacgtggggaagaatgagcacctctggaggtctgggcagctc
gggaaatgcagtgatccctactgcacagcttgtcccatgttctatgatgctaaggggcag
cagaagccgtcaaggacaacagcgatgattgatgctaagtatcacaacatgctctatggc
gatgcacaaagttgggcaaagagaatgagttcgcgttttctttcttatattcccggggtt
attaatcctcatgcaaaactcgttcagtggtggaacaagttcttcgttatcttttgcatt
gtcgcgtcatttctcgatccatttttctttttcctattgtttgtgcgcaaggattacaaa
tgcgtcgaattaattatgcctaagactcgagaatttctcatcttaaggaccattaccgac
tgcgtttatttcatgcatatcctccttcagttcaggctagcttatgttgctcctgaaaca
agagttgcagggtcaggcgatttagttgatgatcctaagaaaattgcttggaattatttc
acgacatactttcctgttgatctacttgttgtacttcccatgccacagattatattaata
tttgtcttaccacactctgcctcgtcacctggaaacgaaattataaaatttgtccttcca
tcggcaattctcgttcagtatataccaaggctgagcagattcttacctttggttgctggt
ttttccccaactggcttcatttttgagtcagcctgggcgaatttcctcatgaatcttctc
acgtacattttggcgagccatgtggttggctcatgctggtatcttcttagcatacagaga
gtcaataaatgccttgaaaatgcatgtgacgggaacaaaaccagtaactgtacgacactc
atcagctgtagtcataattatgaacagaggtttgcagacattccggactggatagactgg
aaaaataatgaaaatgcaagtgcttgttttacgaaagacggttttgacttcggtatatgt
gaagctgctgtcaatctgaccacccacaaggaaatttttgatagatacttgtattcactc
ttttgggggttccagcaaattagtacgctagctgggaatcaggagccgagctacatgcct
ctcgaagttattttcaccatgttcataatagggataggtctgctgcttttcgctcttctg
attgggaatatgcagaactttctgcaggcacttggacgcaggaggttagaaaagtcttta
agaggccgcgatgttgaacaatggatgagccatcgtcgcttacctaaaaatcttcgaagg
caagtccgagctgcagaacgcttcaactggtcagcaactaggggtgtaaacgaagacacg
ctgatagagaacttgccagaggaccttcaacgagaaattaggcgccatctctttaagttc
gtcaagaaagtacggatttttcaacttctcgatgaacctgtcattgatgctatacaagag
aagctgaagacaagatcctacatcagaaacactaagatcctatatccgggtggtctagtt
gataaaatagtatttataattcgtggagagatgaagagcacgggagaagatggcaacgat
tctatcctgtctgaaggcgatgtttgcggagaagaactacttacctggtgcctcgaacat
tcttccgtcagtcaagatggaaagagtattagacttccacgacatgggctgttgagcgac
aggcatgtaacttgcttaacaaacgtcgaagcctttgtattacgagctgctgattttgaa
gaagtggcgggtctcttcacaaggttcttgaagaatccactcgttcagggcgccataagg
tatgactcacctcattggcgtggaattgcagctagacgaatccaactagcgtggagacac
agaaggaagcaaacaaatcgagttgattcaagtcaagtaggttcctcaaggtcaccgcac
aacttgtcatatcggactagaagcaggcgtaaatag
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