Salvia splendens (scarlet sage): 121759313
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Entry
121759313 CDS
T07627
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
121759313
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sspl04040
]
121759313
Ion channels [BR:
sspl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
121759313
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GFIT
Motif
Pfam:
Ion_trans
Motif
Other DBs
NCBI-GeneID:
121759313
NCBI-ProteinID:
XP_042010785
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Position
12:29122107..29127586
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AA seq
658 aa
AA seq
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MMNAEFLYAGVFEAMDASSRDEAPMLPASHLQSDDGVSSARRGISGKTRSVSMSFAMESP
HPSEYQQNLVGLTGPLRQNSQVQMSGPLHPNRNNEVIFRPPQTAAEPENQARNGDGDYVG
KNENLLSSGQLGKCSDPYCTACPIYYVQQKPLRTTEMIDAKYRNMLYGDAQSWAKRMRSH
FLSYIPGVINPHAKLVQWWKKFFVICCIVASFLDPFFFFLFFVNKDYNCVELIWPKTREF
LILRTIIDCVYFMHILLQFRLAYVAPETRVAGSGDLVDDPKMIAWNYFTTYFLVDLVVVL
PLPQIILIFVLPHSASSPGIGIIKFVLPLAILVQYIPRLCRFLPSVAGFSPTGFMFESDW
ANFLMNLLMYILASHVVGSCWYFLSIQRVNKCFEDACHGGNKISNCTKFISCNHGYEKRF
TPMPDWNDSKNNENANVCFMKDSFDFGIFVAAVNLTTNSDIFDRYLYSLFWGFQQISTLA
GNQEPSYVPLEVVFTMFIIGIGLLLFALLIGNMQTILQELGRRRLEKSLRGRKVEQWMKH
LRLPNNLQSQVRAAERFNWATGRGVNKDAMIENFPEDLQRNIRRHLFKLVKKLRIFQLLD
EPVIDAIQEKLKTTSYIRGSEILYPGGLVDKTVFIIRGKMKSTGEDVIQVLYYYYYLV
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgcagagttcctctatgcaggtgtatttgaagcaatggatgcttcatcgaga
gatgaagcacctatgctgccagcttcacatttacagtccgatgatggtgtctcctctgca
agaagagggatttctggtaagacgaggagtgtgtcaatgtctttcgctatggagtctcca
catccatccgaataccagcaaaatctagttggtttaactggccctttgaggcaaaattct
caagtacagatgagtggtccattacatcctaaccggaacaacgaggtcatctttaggcct
cctcagacagctgctgagcctgagaatcaggccaggaatggtgatggggactacgtgggg
aagaatgagaacctcttgagctctgggcagctcgggaagtgcagtgatccctactgcaca
gcttgtcccatctattatgttcagcagaagccgttaaggaccacagagatgattgatgct
aagtatcgcaatatgctctatggcgatgcacaaagttgggcaaagagaatgcgttcgcat
ttcctttcttacattcctggggttattaatcctcatgcaaaactcgttcaatggtggaaa
aagttcttcgttatctgttgcattgttgcgtcatttctcgatccatttttctttttccta
ttttttgtgaacaaggattacaactgcgtcgaattaatttggcctaagacacgagaattt
ctcatcttgaggaccattatcgactgcgtttatttcatgcatatcctccttcagtttagg
ctagcttatgttgctcctgaaacaagagttgcagggtctggcgatttagttgatgatcct
aagatgatagcctggaattatttcacgacatactttcttgtcgatctagttgttgtactt
cccttgccacagattatattaatatttgtcttaccacactctgcctcgtcacctggaatc
ggaattataaaatttgtccttccattggctattctcgttcagtatataccaaggctgtgc
agattcttaccttctgttgctggtttttccccaactggcttcatgtttgagtcagactgg
gcaaatttcctcatgaatcttctcatgtacattttagcgagccatgtggttggctcatgc
tggtattttcttagcatacagagggtcaataaatgctttgaagatgcatgccatggcggg
aacaaaatcagtaactgtacaaaattcatcagctgtaatcatggatatgagaagaggttt
acacccatgccggactggaatgactcgaaaaataatgaaaatgcaaatgtttgttttatg
aaagacagttttgacttcgggatatttgtagctgctgtcaatctgaccaccaacagcgac
attttcgatagatacttgtattcactcttttgggggttccagcaaattagtacgctagct
gggaatcaggagccgagctacgtgcctctcgaagttgttttcaccatgttcataataggg
ataggtctgctgcttttcgctcttctgattgggaatatgcagaccattctgcaggaactt
ggacgcaggaggttagaaaagtctttgagaggccgcaaagttgaacaatggatgaaacat
cttcgcttacctaataatcttcaaagtcaagtccgagctgcagaacgcttcaactgggca
acaggtaggggtgtaaacaaagacgcgatgatagagaactttccagaggaccttcaacga
aatattaggcgccatctttttaagttagtcaagaaactacggatttttcaacttctcgat
gaacctgtcattgatgctatacaagagaagctgaaaacaacatcctacattagaggcagt
gagatattatatccaggtggtctagttgataaaacagtatttataattcgtggaaagatg
aagagcacgggagaagatgtgatacaagtcttatactactattattatttagtttag
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