Salvia splendens (scarlet sage): 121759329
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Entry
121759329 CDS
T07627
Name
(RefSeq) cyclin-H1-1-like isoform X1
KO
K06634
cyclin H
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03022
Basal transcription factors
sspl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121759329
09124 Replication and repair
03420 Nucleotide excision repair
121759329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121759329
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121759329
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
121759329
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
121759329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
RB_B
Ku_C
DUF2031
Motif
Other DBs
NCBI-GeneID:
121759329
NCBI-ProteinID:
XP_042010806
LinkDB
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Position
12:complement(221951..226083)
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AA seq
327 aa
AA seq
DB search
MADFATSTHRAKWIFTPQALKEKYKEANKRAKQALEKYGATRMEVDVDGSFSYAEPQTDA
KASADKHSRPKALKIEEEQLLRAFYEFKIQDVCDALTLPHKIQATALIYFKRFYLQWSVM
EHHPKNIMLTCIYAACKAEENHVSAEQLGIGIEQDHHMILDNEMLVLQSLGFDLIVYSPY
RPLQGFITDMEEFGDANERQPEIMKNFHESAKAEVDRIMRTEAPLLFPPGQLALAAVRRS
CELHNAIDFERYLKNVHYRQHPAHGISELYLNMNAIDVLINKLETPTSKDVKHIDRKLKS
CLDPASHEKSKKRKHRSNEGSSEMHVM
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcagattttgcgacttcgacacacagagcgaagtggatattcacgcctcaggctctt
aaggaaaaatacaaggaagctaataaacgagctaagcaagcacttgagaagtatggagct
acacggatggaagtagatgttgatggatctttctcttatgctgaaccacaaactgatgca
aaggctagtgctgacaagcattcacgtccaaaagctctcaagatagaagaagaacaactt
ttgcgggccttctacgagtttaaaatccaagatgtttgtgatgccctcacgcttccacat
aaaattcaggccacagctttaatctacttcaaaaggttctatttgcaatggtccgtgatg
gagcatcatccaaagaatataatgttaacatgcatatatgctgcttgtaaggccgaggag
aaccatgtgtcagcagagcagcttgggatagggatcgaacaggatcatcatatgattctt
gataatgaaatgctggttcttcagagtctaggatttgacctcatagtctattcaccatat
cgaccacttcaaggctttatcactgatatggaggagtttggtgatgcaaatgagaggcag
cctgagattatgaagaattttcatgaatctgccaaagctgaagttgatagaattatgcgt
acggaagctccccttctattcccaccagggcagctagcattggcagctgtacgaagatct
tgtgagttgcataatgctatcgactttgagagatacctgaaaaatgtgcactatcggcag
catccagctcatggcatttcagagctctatcttaacatgaatgcaattgatgtgttgatt
aataagctagagacccctacctcgaaagatgtaaagcacatcgataggaaacttaaatca
tgcttggatccagcttcacatgagaagagcaagaaacgaaagcacagatcaaatgagggt
tcgagcgaaatgcatgtcatgtaa
DBGET
integrated database retrieval system
