Salvia splendens (scarlet sage): 121759433
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Entry
121759433 CDS
T07627
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36-like
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121759433
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121759433
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
90S particles
Helicases
121759433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
121759433
NCBI-ProteinID:
XP_042010943
LinkDB
All DBs
Position
12:complement(4143460..4147355)
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AA seq
488 aa
AA seq
DB search
MEEEIQLEPSFQLFSRKKKKSTTTVDNPPPPATSAVKELEKVLNPNPTPAHITFSDLGLA
EWAVNTCKELKMKRPTPVQYHCIPKILAGRDVLGLAQTGSGKTAAFVLPILQRLAEDPYG
VFALVVTPTRELAHQLADQFKALGSGLGLRCVEIVGGMDMITQSRSLMQRPHVVVATPGR
IKFLLEQNPDLPAIFSRTKFLVLDEADRVMDINFEAELRVIFQCLPKKRQTLLFTATMSS
NLQTLLELSANKTYFYAAYEGFKTVESLKQQYIFIPKNVRDVYLLHILNKMKEMGVRSAM
IFVSTCRSCELLSLLLEQLDLEVAALHSYKSQSLRLSALHKFKSGQVPILIATDVANRGL
DIPTVDLVINYDIPRYPEDYIHRVGRTARVGRGGLALSFITKNDVDLVHKIEDLIGKKFD
EFECKEKDVLEDITKVYKARRVTVMKMMDSGFEEKAMARKEQKSRTKEIRRKSKKRKRGK
AIEVSQNS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaaatccaacttgaaccaagtttccaattgttctcccgtaaaaagaagaaa
tcaaccacaacagtcgacaatccgccgccaccagcaacctccgccgtgaaggaattggag
aaagtactaaaccctaaccctacaccggcgcacatcaccttctccgacctagggctggcg
gaatgggctgtaaacacctgcaaggagctcaagatgaagcgtccaactccagtgcagtac
cattgcatccccaaaatcctggccggccgggacgtgcttggcctcgcgcagaccgggagc
ggcaagacggcggcgttcgtcctcccgatcctccagcgcctcgccgaggatccgtatggg
gtgtttgcactggtggtgactccgacgcgggagctggctcaccaattggcggatcagttt
aaggcgctcgggtcgggattagggctccggtgcgtggagattgttggcgggatggatatg
attacgcagtcgcggagtttgatgcagaggccgcatgtggtggttgctactccgggaagg
attaaatttctgcttgaacagaatcctgatttgcctgctattttctctagaactaagttt
ctagtgttggatgaagctgacagagtcatggacattaactttgaagcagagttgagagtt
atttttcagtgcttacctaagaaacggcaaacgttactatttactgccaccatgagtagc
aacttacagacgttacttgaactctcggcaaataaaacatatttctatgcagcatatgaa
ggttttaaaacagtggaatctctgaagcaacagtatatttttattcccaagaatgtgagg
gatgtgtaccttctccacatattgaacaaaatgaaggaaatgggtgttcgatcggccatg
atatttgtttccacctgcaggagttgtgaacttctgagtttgttgctagaacagcttgat
cttgaagtagcagcattgcactcttataaatcccagtcgttgaggctttcggcattacat
aaattcaaatccgggcaggtccctatactaattgcaaccgatgttgctaaccgtggttta
gacataccaacagtagatttggtcataaactatgacattccaaggtatccagaggattat
attcatcgagttggtcgtactgctagagtaggaagaggaggccttgctcttagcttcatc
accaagaatgatgtggaccttgtgcataaaatagaagatcttatagggaaaaaatttgat
gagttcgagtgtaaggagaaggatgtacttgaggatatcacaaaggtatacaaggctagg
cgcgtgacagtgatgaaaatgatggacagcgggtttgaggagaaggccatggcacgaaag
gagcagaagtcgagaacaaaagaaattcgaagaaaaagtaagaaacggaagaggggcaaa
gctatcgaagtatctcaaaactcctaa
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