Salvia splendens (scarlet sage): 121759484
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Entry
121759484 CDS
T07627
Name
(RefSeq) protein VACUOLELESS1-like
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121759484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121759484
Membrane trafficking [BR:
sspl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121759484
Hops complex
121759484
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
121759484
NCBI-ProteinID:
XP_042011014
LinkDB
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Position
12:complement(2173637..2180116)
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AA seq
840 aa
AA seq
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MAGVTVAAEWQLLYNRYYRKPELYQMEWKQVDLTRNKIACAPFAGPIAAIRDDAKIVHLY
AESALRKLRIFTSSGRLTAESVWRNPGGRLIGMFWTDDLTLACITQDGTVYSYSVHAELL
STFSLGKECFNFDNSVVDCVFWGNGVVCITEALEILAVPDFKAPRAVKLADCGLEELPHC
MAVIEPGYAKSGGVEVLLGVGDHVLLVEEDGIQPLAAGIGPLQKMVLSRKGEFVASFTHD
GRLLVMSSDFSKEFIDYTCESALPPEQLAWCGSDAVLLYWEDMLLMVGPYEEPVRYIYDE
PIILIPECDGVRILSNTTMEFLHRVPDSTVSIFQIGSTSPPALLYDALEHFDRRSAKAAE
NLKLIHSSLPEAVESCIDAAGYEFDISLQRTLLRAASYGQTFSSHVRRDSVREICQMLRV
LNAVRDVDIGIPLSLQQYKLLTPSVLINRLIKAHKHLLALRLSEYLGLSQEVVIMHWACT
KISASAMIPDATLLQILLDKLKICKGISYAAVAAHADKRGRRKLAAMLVEHELCSSKQIP
LLLSIGEEYSALVKATESGDTDLVYLVMFHIWKKSSPMEFFSTIQARPLARDLFIKYARC
YKHEFLKDFFLSTGQLQEVAYLLWKESWELAKDPRAKGSSFGARIKLIEKASNLFAESNE
HMFESNAAEEHAKLLRIQRELEITTKQAIFLDSSVSDTIRTCIVLGNHRAANKVRAEFKV
ADKRWYWLKCFALATIQDWDALEKFSKEKRPPIGYRPFVEACIDAGKKDEALKYIPKLSD
LGERAEAFAKIGMAREAADAASQSRDSELLARFRQSFSQNAGGSSIFDALRDRLLFQALS
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagtcacggtagcggcggaatggcagctcctctacaatcgctactaccggaaa
ccggagctctaccagatggagtggaagcaagtcgacctcacgcgcaacaaaatcgcgtgc
gcccccttcgccggccccatcgccgccatccgcgacgacgccaaaatcgtccacctctac
gccgaatccgccctccgcaagctccgaatctttacctcctccggccgcctcaccgccgaa
tccgtctggcgcaaccccggcggccgcctgatcggaatgttctggaccgacgacctaacc
ctagcctgcatcacgcaggacggtaccgtctactcctacagcgtccacgccgagctcctt
tccaccttctccctcggcaaggagtgcttcaatttcgacaacagcgtcgtcgattgcgtg
ttttgggggaacggcgtcgtttgcatcaccgaggcgcttgagattctcgcggtgccggat
tttaaggcgccgagggcggttaaattggcggattgtggattggaggagctgccgcattgt
atggcggtgattgagccagggtatgcaaaatcggggggtgtggaggtgctgctaggggtt
ggggatcatgtgttgctggtggaggaggatggaattcagccgttggcggccggaattgga
ccgctgcagaagatggtgttgtcgaggaaaggggaatttgttgcgtccttcactcatgat
ggaaggcttctggttatgtcctctgatttttccaaagagttcattgattatacttgtgag
tcagccctcccaccagaacaactagcttggtgcggatcggatgctgtgttactctactgg
gaggacatgttgttgatggtgggtccctatgaagagccggtacggtacatttatgatgag
ccaattattcttattccagaatgcgatggggtgcgtatattatctaacacaaccatggag
tttttgcatcgagttccagactctacagtatcaatctttcagattggaagcacatcacct
cctgctttattgtatgatgccttggagcattttgataggcgaagtgcaaaggctgctgag
aacttgaaattaatccactcttcattgcctgaagctgttgagtcttgtatagatgctgcc
ggctatgaatttgatatttcactgcaaaggacactattgagagctgcaagttatggtcaa
accttttctagccatgttcgacgtgacagtgtacgagagatatgtcagatgctccgtgtc
ttaaatgctgtacgtgatgtcgacattggaattcctctaagccttcagcagtacaagtta
cttactccatctgttctgatcaaccgtctaattaaagcccacaaacaccttctagctctg
cgactatcagaatacctcggcttaagccaagaagttgtaataatgcactgggcgtgtaca
aagatatcagcttccgcaatgattcctgatgccactcttcttcagattctacttgacaag
ttgaagatatgcaaaggaatatcttatgcagctgttgctgctcatgctgataagcgtggc
cgcaggaaattagctgctatgctagttgaacatgagctgtgctcctctaaacagatccct
ctcttgctaagtattggggaagaatattcagcacttgtgaaggctaccgaaagtggagac
actgatcttgtttatcttgtcatgtttcatatctggaagaagagttcgccaatggagttt
ttttcaacaatacaggctagacctcttgcacgtgatctgtttatcaaatacgctcggtgt
tacaagcatgagttcttgaaggacttctttctatccactgggcaactccaggaggtagct
tatctcttgtggaaagaatcgtgggaacttgcaaaagatccaagggccaaaggatcatct
tttggtgcacgcataaaactaatcgaaaaagctagcaatctttttgcggaatcaaatgaa
catatgtttgagtccaacgcagctgaggaacatgccaaactgttaagaattcaacgtgaa
ttagagataacaacaaaacaggctatttttctggattcaagtgtcagcgacacaattcga
acatgcattgttctgggaaatcatcgtgctgcaaataaagttagagctgaatttaaggtt
gctgacaagcgatggtattggcttaaatgctttgctctggcaacaatccaagactgggat
gcgctggaaaaattttcgaaagagaagagaccaccaattggttatcgtccatttgtggaa
gcttgcattgacgcgggtaagaaagatgaagcactgaagtacataccgaagctttcagat
ctgggagagagagctgaagctttcgctaaaatcgggatggccagggaagctgcagatgca
gcatctcagtccagggatagcgaactgctagcgagattcagacagtcgttttcacaaaat
gctggaggttcttcgatctttgatgctcttcgcgaccgcttattgttccaagctctctct
tag
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