Salvia splendens (scarlet sage): 121759518
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Entry
121759518 CDS
T07627
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121759518
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121759518
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
121759518
NCBI-ProteinID:
XP_042011066
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Position
12:29113364..29115316
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AA seq
407 aa
AA seq
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MALSSPIQSLLILISFFLFTSLIAAMPTLQDPELVVHEVHRKLNASRRRLGFLSCNTGNP
IDDCWRCDPNWEQNRQKLADCAIGFGKNAIGGRDGKIYIVTDSKDDDPVNPKPGTLRHAV
IQDEPLWIIFERDMVIQLKEELIMNSFKTIDGRGASVHIANGPCITIQYVTNIIIHGVHI
HDCKQGGNAKVRDSPQHFGWRTLSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGATG
ITISNNYMTHHNKVMLLGHSDTYMQDKGMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND
YTHWEMYAIGGSADPTINSQGNRFLAPNDRFNKQVTKHEDAPESQWKNWNWRSEGDLMLN
GAFFVASGVGASSSYAKASSLGARPSSLVGPITSGAGALVCRKGSHC
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcactctcttcaccaatccaatccctacttatcctaatatcatttttcctattcaca
tcactcattgccgccatgccaaccctacaagaccctgagcttgtagtccatgaagtacat
aggaaactaaatgcttctagaagaaggttgggattcttatcatgcaacactggtaaccca
atcgatgactgctggcggtgtgaccccaactgggagcagaatcgccagaagctagctgat
tgtgccataggttttggtaagaacgctatcggcggaagggatgggaagatctacattgtg
acagactcaaaagacgatgatcccgtgaaccctaagccagggacgctccgccatgctgtg
atccaagacgagccattgtggatcatattcgagcgtgacatggtcattcaattgaaggag
gaattgatcatgaactcatttaagaccattgatggtaggggcgctagtgtgcacattgca
aacggtccatgcatcaccatacaatatgtgaccaacatcatcatccatggtgttcatata
catgactgtaagcaaggcgggaacgctaaggtgcgggactccccacagcacttcgggtgg
aggaccttatccgacggtgatggggtgtcgatctttggcgggagccacgtgtgggttgat
cattgttccttgtctaactgcaatgatgggctcattgatgcaatccatggggccacgggt
attacaatctctaataattatatgactcatcataataaggtcatgcttttagggcatagt
gatacatatatgcaagataagggcatgcaagtcaccattgcattcaatcactttggagaa
gggcttgtacaaagaatgccaagatgtagacatggctactttcatgtggtgaacaatgac
tacactcattgggagatgtatgctattggagggagtgctgaccccacaattaatagccaa
ggcaatagatttcttgcccctaatgacagatttaacaaacaggttacaaaacacgaggac
gcacccgaaagccagtggaagaactggaattggagatcggagggagacctaatgctaaat
ggtgcattttttgtagcttcgggtgtgggggcctcgtcgagttatgctaaggcgtcgagc
ttaggtgctcggccatcaagcctagtgggacccatcacctccggtgccggtgctctcgtc
tgccggaagggctctcactgctaa
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