Salvia splendens (scarlet sage): 121759630
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Entry
121759630 CDS
T07627
Name
(RefSeq) protein CHROMATIN REMODELING 25-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121759630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121759630
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
121759630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
121759630
NCBI-ProteinID:
XP_042011219
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Position
12:complement(30009006..30028368)
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AA seq
917 aa
AA seq
DB search
MEDEDETISNSGDSAGSEPDYDVSPESNGSDCDSEDEEIPAPQPNLRRKLQNVSALVRGN
LEVNRLSLFPRVYSVVGSEATIRKPFKPPSSFGYSENKERLARRLSARKRFVPWGSTRPV
LVQITNIFSTPKTVENDPEESESLPPEIEPLVLWQPEEAKDQNDESFIIVDPLLVKFLRP
HQREGVQFMFVCVSGMLSAENINGCILADDMGLGKTLQSITLLYTLLRQGFDGEPMVKKA
IIVTPTSLVSNWEAEIKKWVGERVKLVALCESTREDVISGIDSFTRSPSPLQVLIISYET
FRMHSSKFNQNGSCDLLICDEAHRLKNDQTLTNRALASLLCKRRILLSGTPMQNDLEEFY
AMVNFTNPGVLGDALYFRRYYEMPIVCSREPTATEEEKRLGSERSTELSAKVNQFILRRT
NALLSNHLPPKIVEVVCCKMSPLQSQLYSHFIQSKNVKRAISEEAKQAKILAYITALKKL
CNHPKLIYDTIKGGSPGTSGFDDCLRFFPPSMFSGRSGSWTGGDGAWVELSGKMHVLSRL
LAQLRQKTDDRIVLVSNYTQTLELLAQLCRERRYPFLRLDGSTSISKRQKLVNRFNDPSK
DEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLST
GTIEEKVYQRQMSKEGLQKVIQQEHVDSEMGNLLSTEDLRDLFTFHENTSSEVHEKMCCN
RCRQEEMMSDSNLAPECTNGGCHIDEDDIGGFAGIAGCSGSLKIHEKQVGIPKEEDLASW
GHHHSPSSVPDLILQASAGDEVSFVFTNQVEGKLTPIESKERAKIEVVERKGLSVLKRGL
SSQAVLPYKTKEMSPAISFSKDATSSFSLKTLPQPHTKLMRTLEGKTKISLSRKSSASFQ
KPSNQLSLACTSDDDFV
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaagacgaaactatctccaattccggagactctgcaggatccgaacccgat
tacgacgtctcccccgaatcaaatggctccgattgtgatagcgaagatgaagaaattccg
gctccgcagccgaacctccggcgaaagttgcaaaacgtatcggccctcgtgaggggaaac
ctggaagtgaatcggctgtcgctatttcctcgagtgtattctgtggtgggttcagaggcc
accataagaaagccctttaagcctccctcctcctttggatactctgagaacaaagagcgg
ttggcacgtcggctttctgctcgcaagcggtttgtgccatgggggtccacgaggcctgtt
ctagtccaaatcacgaacatttttagtactcccaagaccgttgagaacgatcccgaggaa
agtgaatcacttcccccagaaattgaacccttggtgttgtggcagccagaagaggccaag
gaccaaaacgatgaatcttttataattgtagatcccctgcttgtgaagtttctcagaccc
catcaaagagaaggtgtgcagttcatgtttgtttgtgtttcgggtatgctcagtgctgaa
aacatcaatggatgcattttggctgatgatatggggttgggaaaaaccttgcagtcgatc
acacttctgtatacccttcttcgtcaaggatttgatggggaaccaatggttaaaaaagca
ataattgtgactcctactagtcttgtgagcaactgggaggctgaaatcaagaaatgggtc
ggggaaagagttaagcttgttgctctttgtgagagtacccgggaagacgttatctctgga
attgatagttttactaggtccccaagccctttacaggtattgattatttcttatgagaca
tttcggatgcattcttcaaaattcaaccaaaatggatcctgtgacctactcatatgcgac
gaggctcacaggctaaagaatgaccaaacattgaccaatcgagcactagcttctctattg
tgcaaacgccgcattttgctctcaggcactccgatgcaaaatgatctggaggagttctat
gccatggttaatttcacaaatccaggagtccttggtgatgctttatattttcggcgatat
tatgagatgccaattgtttgtagtcgagagccaacagctactgaagaagaaaagagactt
ggctcagagcgctctacagaactaagtgcaaaagtaaaccagtttatattgcgaaggaca
aatgcattactatctaaccacctaccacccaagatagttgaagtagtgtgctgcaaaatg
tcgccactccaatctcagctctacagccattttatccaatcaaaaaatgtcaaaagagca
atttcagaggaagcaaagcaagcaaagatcttagcatatataactgctcttaagaagctc
tgcaatcacccaaagttaatatatgatacaattaagggtggtagcccaggaacatcagga
tttgatgattgtttgcgtttcttcccaccgtcaatgttctctggaagatctggttcctgg
actggtggagatggggcatgggttgagctatcaggaaaaatgcatgtattatcccggtta
ctggctcagcttcgtcaaaaaacagatgataggattgttctagtttcaaattacactcag
acattggaacttcttgctcaattatgtcgtgaaagaagatacccattcctaagacttgat
gggagtacatcaatcagcaaaagacagaagttggttaatcgttttaatgatccttcaaag
gatgagtttgcatttctcttgagtagcaaagctggtggctgtggcctcaatttaattggt
ggaaatcgactggttctctttgatcctgattggaatcctgccaatgataaacaagctgct
gcaagggtctggagggatggccagaagaagagagtctacatctataggtttttgagtact
ggcaccattgaagaaaaggtttaccagcgtcagatgtcaaaagaaggtcttcaaaaagtt
atacagcaggagcatgtagattcggagatgggaaatctactttcaacggaagatctacgc
gacctgttcacatttcatgagaacacaagttcggaagttcatgaaaagatgtgctgcaac
cgctgtagacaagaagaaatgatgtctgatagcaatctcgcacctgagtgcacgaatggg
ggctgccatattgatgaagatgacataggggggtttgcaggcattgccgggtgctccgga
agtttgaaaatccatgaaaaacaggttgggattcccaaggaagaggatttagctagctgg
gggcatcatcattctccatcatctgtacctgatctcatacttcaggcttctgcaggagat
gaggtttcatttgtttttacaaatcaagtagagggaaaacttactcctattgaatcaaaa
gagagagcaaagatagaggtggtagaacgcaaaggcctctctgttttaaaaagaggcctc
tcctcacaagcagtgttgccatataagaccaaagaaatgtctccagcaatctcttttagt
aaagatgcaacaagctcattcagtttgaagactctgcctcagccacacacaaaactaatg
cgaactttagaaggtaaaactaaaatctcgctgtcacggaaaagctcagcgagttttcaa
aaaccttcaaatcagttatctcttgcttgcaccagtgatgatgattttgtgtag
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