Salvia splendens (scarlet sage): 121759756
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Entry
121759756 CDS
T07627
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121759756
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
121759756
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
GMNC_CC
PH_FT_C
AAA_27
Motif
Other DBs
NCBI-GeneID:
121759756
NCBI-ProteinID:
XP_042011379
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Position
12:complement(26400262..26414561)
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AA seq
1052 aa
AA seq
DB search
MVDEPSPKRPKISRGDDDYVPGNIIKIEICNFMTFSKLTCKPGSRLNLVIGPNGSGKSSL
VCAIALGLGGEPSILGRAKKIGAYVKRGEESGYIEISLRGKRKEEQITIMRKIDIHNKSE
WLFNGKVVGRKVISEVIAGFNIQVDNLTQFLPQDRVCEFAKLTPVQLLVETEKAVGDPRL
PVQHNNLIEKSKELKKCERAVESNRGSLDQLTAMNAELERDVERVRQREDLLAKADSMKK
KLPWLKYDMKKVKYQEAKKQEDDAKLKLKEAAKDLNDLRVPIEKQREDKGKQDAKFKKMN
GLLDSNMKKRMHLMENYDRLGALIQGKFREVDDLRHHEKSRQQRLSKAKEDLATAETEFA
NLVPYEPPKDKMKQLSAQIVELEEAAKEIRYEKRENEKQINDHRTLLSQCMNRLKEMENV
NNKRLQALKNSGAEKIFGAYQWVQDHRAEFKREVYGPVLLEVNVTNRLHAGYLEGHVAHY
IWKAFITQDSEDRDLLVRNLRSFDVPVINYVMTGNHQSGSFQATDEMRKLGISSRLDQVF
EAPHAVKEVLISQFYLDQSYIGSKETDEKADMVNELGIADLWTPENHYRWCRSRYGGHVS
TNVEAVEQSRLLLCNLDVKEIEVVRSKQIAQEDKISTMDVTLKSLQATLRQKEDEAAELQ
HEREKIVNIIQKEKRKWRDMEHFVNQKRIKLKSIESEDDPDAAIDKLTEQVKDLKVQRFQ
CIFELKNLLIDAVAYRRSFAENNMSSIELDSKIKDMEANAKQQEKLALQASLFLDHCKSA
SDNCRKELQDAKRYAESVAIITPELQQAFLEMPTTVEELEAAIQDTITQANGILFLNHNI
LEEYENRQRKIEALTNKQEADEKELKSLLDEIDALKGSWLPTLKSLVARINETFSCNFQE
MAVAGEVSLDEHGTDFDQYGILIKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDL
TNCPFRVVDEINQGMDPINERKMFQQLVKAASRPNTPQCFLLTPKLLANLEYSDACSILT
VMNGPWIDQPSKVWSGGENWSSIRMQLENNCC
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggtggacgagccatcgcccaagaggcccaaaatttccaggggggatgatgactatgtc
cctggaaatataattaaaattgagatttgcaacttcatgaccttcagcaaactgacttgc
aagcccggttcacgcttaaatttggttattgggccaaatggctctggaaagagttctctc
gtatgtgccattgcacttggacttggaggtgaaccatcgattcttggaagggctaagaaa
attggagcttacgtgaaacgtggagaggaatctggatatattgagattagtttgagagga
aagaggaaggaagaacaaattaccattatgaggaaaattgatatccataacaaatctgag
tggctgtttaatggtaaagtggttgggagaaaggtgattagcgaagtaattgcaggattc
aatatccaagttgataatttgactcaatttctaccacaagacagagtttgtgagttcgcc
aagctgaccccagtacaactccttgtggagactgaaaaagctgttggcgatcctagatta
cctgttcagcataataatctcattgagaagagtaaagagttgaagaaatgtgaacgagct
gtcgagagcaatagagggtctttggatcaactgacggctatgaatgctgaattagaaaga
gatgtcgaacgtgttcgccaaagagaagatctcttagcgaaggctgattctatgaagaaa
aagttaccatggttgaagtatgatatgaagaaggtaaaatatcaagaagccaaaaaacag
gaagatgatgcgaagctgaagctaaaagaagctgctaaggatctgaatgatcttagagta
cctattgagaaacaaagagaggacaaaggaaagcaggatgctaaatttaaaaagatgaat
ggtttgctagatagtaatatgaagaagcgtatgcatcttatggaaaattatgaccgcttg
ggtgctctgatccaagggaaatttcgtgaagtggatgatttgaggcatcatgaaaaatct
cgccaacaaagactctctaaagctaaagaagatctcgccactgcagagactgaatttgca
aatctcgttccctatgaacccccgaaggataagatgaaacaattgagtgctcaaatcgtg
gagcttgaagaggctgctaaagagatcagatatgagaaaagggaaaatgagaagcagata
aacgatcatagaacgttgctgtcgcagtgtatgaacaggttgaaagagatggagaacgta
aacaataagcgtttgcaagcattaaagaattctggtgctgagaagatattcggggcttac
caatgggttcaggaccatcgtgccgagttcaaaagggaagtgtatggtcctgtattgctt
gaggtcaatgtaaccaatcggctgcatgcaggctacctagagggtcatgttgcccattac
atatggaaggcttttattactcaggactccgaggaccgtgatttactggttagaaaccta
aggtcctttgatgttcctgtaattaattatgtcatgacagggaaccaccagagtggctcc
ttccaggcaaccgatgagatgcgtaaacttggcatatcttccaggcttgatcaggtgttt
gaagctcctcatgctgtcaaagaagttttgatcagccaattttatttggatcaatcatat
attgggtcaaaagagactgatgagaaagctgatatggtaaatgaattgggaatcgcagac
ctgtggaccccagaaaatcattatcgttggtgcaggtcccgctacgggggtcatgtatct
acaaatgttgaagccgtagaacagtctcgcctacttttgtgcaatttggatgtgaaggaa
attgaggttgtaagatcgaagcaaatcgcgcaggaagataaaatttctaccatggatgtt
actttaaaatctcttcaagctaccttaagacagaaagaagatgaagctgcggagcttcaa
catgaaagggagaagattgttaacatcattcaaaaggagaagaggaaatggagggacatg
gaacattttgtcaatcaaaaaagaataaagttgaagtcaatagaaagtgaggatgatcca
gatgctgccatagataagctcactgagcaggttaaagacttgaaggttcagcgcttccaa
tgtatatttgaacttaagaatttacttatagatgctgttgcttatcggagaagtttcgct
gaaaataacatgagttccattgaacttgactccaagattaaggacatggaggccaatgca
aagcaacaagagaagttagccttgcaagcatcattattccttgaccactgtaaaagtgcc
tcagataattgccgaaaggagctgcaggatgccaagagatatgcagaatcagttgctatt
attacgcctgagcttcagcaggccttcctggagatgcctactactgttgaagaactggaa
gctgccatccaggatacgataactcaagcaaatggcatcctgttccttaaccataatatt
ctggaggaatatgaaaaccgtcaaagaaaaattgaagcacttactaacaagcaagaggct
gatgaaaaggaattaaaaagcctgttagatgaaatcgatgctctgaagggaagttggctc
ccaacattgaaaagcctcgtggctcggattaatgaaacttttagttgtaatttccaagaa
atggctgttgcaggcgaagtgtcattagatgaacatggcacagattttgatcaatatgga
atattgataaaagtgaaattcaggcaaactggacagctgcaagttttaagtgctcaccac
caatctggaggggagcgttctgtttcaaccattctctacctcgtttctttgcaagacctg
acaaactgcccatttagggtggttgatgagataaatcaaggcatggaccccataaatgag
aggaaaatgtttcagcaattggtgaaagcagccagcaggccaaacacaccgcagtgcttt
ctgctcacccctaaattgctggcaaacctagaatacagcgacgcatgcagcattctgact
gtgatgaacggtccttggatcgatcagccttcaaaagtgtggagtggtggtgaaaactgg
tcttcaatcagaatgcagctggagaataactgctgctaa
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