Salvia splendens (scarlet sage): 121759847
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Entry
121759847 CDS
T07627
Name
(RefSeq) serine/arginine-rich splicing factor RS41-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121759847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121759847
Spliceosome [BR:
sspl03041
]
Common components
Common spliceosomal components
SR proteins
121759847
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_Nup35
SET_assoc
Motif
Other DBs
NCBI-GeneID:
121759847
NCBI-ProteinID:
XP_042011388
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All DBs
Position
2:4945076..4948357
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AA seq
344 aa
AA seq
DB search
MLIYVICQKKKHHVFSVAEPPCSKVSLPQDSLDIPQSSSMDGSLRLFSGLCPRYMFLFVR
KRTNMICHGPTILHFPPLPFAFLMTLPSLQFPTSFNINSMLIPDAVAGFAFIYMEDERDA
GDAIRKLDRIEFGKKRRQLRVEWTKQERGGRNPDSSRKSSANAKPSKTLFVINFDPVNTR
TRDLERHFEHYGKISNVRIRRNFAFVQFELQEDATRALESAKMSKFMDRVISVEYATRDD
DDKRNVSSPDRRGRDRSPPNGRSYGRGGRSPSPYHRERGSPDYGHGAAPNSRSDRRSSPD
YGRAISPVNDRYKSRSPRARERSPVSERSPVPERSPVRGRSDSS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcttatatatgttatttgccagaagaagaaacatcacgttttttctgtagcggaacct
ccatgctcaaaagtttctttgccgcaggattccttggatattccacaatcttcctcgatg
gatggttctctgcgtttattttctggcttgtgtccaagatacatgttcttgtttgttcga
aaaagaaccaatatgatctgccatggtcccaccatcctacacttcccaccattgcctttt
gcattcctcatgactttgccatctcttcaatttccgacatctttcaacataaatagcatg
ctcattccggatgcagtggcaggctttgctttcatctatatggaagatgagcgtgatgca
ggggatgcaataaggaaactcgacagaattgagtttggcaaaaaaagacgccaactacgt
gttgagtggaccaagcaagaacgtggtggcagaaatcctgacagctcaaggaaatcttca
gccaatgcgaagccttcgaaaaccttatttgttattaactttgaccctgtcaatacaagg
accagggatcttgaaaggcattttgaacactatgggaagatatcaaatgtcagaatcaga
agaaattttgcatttgtgcaatttgagttgcaagaagatgctacccgagcactggaaagc
gctaagatgagcaagttcatggaccgggttatttctgtggagtatgcaacacgggatgat
gatgacaaaagaaatgtctctagccctgatagaaggggtcgggacaggtctccacccaat
ggaagaagctatggtcgtggtggacgctccccaagtccataccatagggaaagaggtagc
cctgattacgggcatggcgctgcacctaattctcgatccgatcgaagaagcagccctgac
tatggcagagccataagccctgtcaatgatagatataaaagccgctcgcctcgtgctcgt
gaaagatctcctgttagtgaaagatctcccgttcctgaaagatctcctgttcgtggaaga
tccgactcttcttga
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