Salvia splendens (scarlet sage): 121760018
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Entry
121760018 CDS
T07627
Name
(RefSeq) protein FIZZY-RELATED 3-like
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121760018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121760018
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
121760018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_EML
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_DCAF4
NBCH_WD40
MIOS_WD40
Beta-prop_RIG_1st
Beta-prop_SPT8
Aldo_ket_red
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
121760018
NCBI-ProteinID:
XP_042011551
LinkDB
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Position
13:32156390..32159708
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AA seq
494 aa
AA seq
DB search
MDNAQRRNRGLNLPASMSETSLQLKTLSSVSPIKLTSPLKSMSPRTIANLSPSKSTSSCS
DRFIPCRSSSRLHTFGLIEKASSVKEGGGASDAYNRLLKTELFGTDFGSGDFGSGGDRGG
GSPISPSKNMLRFKTEQHSSGPNSPFSQSILGQDSVGSGEAATPPKPPRKVPKTPHKVLD
APSLQDDFYLNLVDWSSQNVLAVGLGTCVYLWSASNSKVTKLCDLGPNDSVCSVQWTREG
SYISVGTSLGQVQVWDGTQCKRLRTMSGHQTRAGVLAWSSRILSSGSRDRNILQHDLRVP
SDYISKLIGHKSEVCGLKWSHDDRELASGGNDNQLLVWNQHSQQPILRLTEHTAAVKAIT
WSPHQNGLLASGGGTADRCIRFWNTTSGNQLNSVDTGSQVCNLAWSKNVNEIVSTHGYSQ
NQIMVWKYPTMSKVATLTGHGLRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSVKTPAQV
KDTGLWSLGRTQIR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggataatgctcagcgaagaaatcgtggcctcaatctgccggcgtcgatgtcggagacg
tctctgcagctgaagacgctctcctccgtatcgccgattaagctcacgtcgcccctgaaa
tcgatgtctccgaggaccatcgcgaatttgtcgccgtcgaaatcgacgtcttcctgcagc
gacagattcattccctgcagatcttcgtcgaggctgcacacgttcggcctgatcgagaag
gcgtcttcggtgaaggagggcggcggcgcgagcgatgcgtacaataggttgctgaaaacg
gagctcttcgggactgattttggatccggtgattttggctcgggtggtgataggggaggg
ggatctccgattagtccgagcaagaacatgctgaggtttaagacggagcagcattcctcc
gggcctaattcgccgttttcgcagtcgattttggggcaggatagtgtgggttctggggag
gcggcgacgccgcctaagccgccgaggaaggtccccaaaacgcctcacaaggtacttgat
gcaccatcgcttcaagatgatttctatctgaacttggttgactggtcttctcagaatgtt
cttgctgtgggattgggaacttgtgtttatttatggagtgcttcgaatagtaaagtaacg
aagttgtgtgacttgggaccgaatgacagcgtatgctcggtccaatggacacgagagggc
tcttacatatcagtcggtacaagtctaggtcaagttcaggtttgggacgggactcagtgc
aagcgtctaagaacaatgtccggccatcaaactagagcaggagtactggcatggagttca
cggatattatcctctggaagcagagacaggaacatacttcagcatgatcttcgggttcca
agtgattatatcagcaagcttattggacacaaatccgaggtgtgtggattgaagtggtcc
catgacgaccgagagcttgcatccggtggaaatgacaaccagttacttgtgtggaatcag
cactcccagcagccgattttgagactaacggagcatacagctgctgtcaaagccattacc
tggtcacctcaccagaacggtcttctagcctctggaggaggaactgcagatcgttgcatc
cgtttctggaacaccacgagcggtaatcaactaaacagtgtcgacacaggaagccaggtt
tgcaatttagcttggagcaaaaatgtcaatgaaatagtgagcacccacggatattcccag
aaccagataatggtgtggaagtatccaactatgtcaaaggttgcaacactaactgggcat
ggtttgagggtattgtacctggcaatgtctcctgatggccagactattgtcaccggagca
ggagacgagacgctcagattctggaacgtctttccatccgttaaaacacctgcacaggtg
aaggacactggcctttggtctttaggaagaactcaaatcagatga
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