Salvia splendens (scarlet sage): 121760026
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Entry
121760026 CDS
T07627
Name
(RefSeq) sm-like protein LSM7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03018
RNA degradation
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121760026
09123 Folding, sorting and degradation
03018 RNA degradation
121760026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121760026
03041 Spliceosome [BR:
sspl03041
]
121760026
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121760026
mRNA degradation factors
5'-3' decay
Lsm complex
121760026
Spliceosome [BR:
sspl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
121760026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
KNOX2
Motif
Other DBs
NCBI-GeneID:
121760026
NCBI-ProteinID:
XP_042011558
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Position
13:5185685..5188811
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AA seq
111 aa
AA seq
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MSGRKETVLDLAKFVDKGVQVKLTGGRLVTGTLKGYDQLLNLVLDEAVEFLRDPEDPLKT
TDQTRRIGLIVCLINVFAEELLLCSFLQQMEQMRFPIHSFSLMGHRCCIPT
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcagaaaagaaactgttctggacttagcgaaattcgttgacaagggtgttcaa
gtcaaactaactggtggaaggctggtgactggaactttaaaaggctatgaccagttgctc
aatcttgttttggatgaagcagtagaatttcttagagatccagaagatcccctaaagaca
actgatcagacccgccgcattggcttaatagtatgtctcatcaatgtgtttgccgaggaa
ctgctgttatgctcgtttctccaacagatggaacagatgagatttccaatccattcgttc
agcctgatggggcatagatgctgcatccctacgtga
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