KEGG   Salvia splendens (scarlet sage): 121760026
Entry
121760026         CDS       T07627                                 
Name
(RefSeq) sm-like protein LSM7 isoform X1
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03018  RNA degradation
sspl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121760026
  09123 Folding, sorting and degradation
   03018 RNA degradation
    121760026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sspl03019]
    121760026
   03041 Spliceosome [BR:sspl03041]
    121760026
Messenger RNA biogenesis [BR:sspl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     121760026
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     121760026
Spliceosome [BR:sspl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    121760026
SSDB
Motif
Pfam: LSM KNOX2
Other DBs
NCBI-GeneID: 121760026
NCBI-ProteinID: XP_042011558
LinkDB
Position
13:5185685..5188811
AA seq 111 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRLVTGTLKGYDQLLNLVLDEAVEFLRDPEDPLKT
TDQTRRIGLIVCLINVFAEELLLCSFLQQMEQMRFPIHSFSLMGHRCCIPT
NT seq 336 nt   +upstreamnt  +downstreamnt
atgtctggcagaaaagaaactgttctggacttagcgaaattcgttgacaagggtgttcaa
gtcaaactaactggtggaaggctggtgactggaactttaaaaggctatgaccagttgctc
aatcttgttttggatgaagcagtagaatttcttagagatccagaagatcccctaaagaca
actgatcagacccgccgcattggcttaatagtatgtctcatcaatgtgtttgccgaggaa
ctgctgttatgctcgtttctccaacagatggaacagatgagatttccaatccattcgttc
agcctgatggggcatagatgctgcatccctacgtga

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