Salvia splendens (scarlet sage): 121760052
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Entry
121760052 CDS
T07627
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II-like isoform X1
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121760052
Spliceosome [BR:
sspl03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
121760052
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
RMMBL
Lactamase_B_6
Lactamase_B
Lactamase_B_2
Lactamase_B_3
Arm_vescicular
Motif
Other DBs
NCBI-GeneID:
121760052
NCBI-ProteinID:
XP_042011587
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Position
13:complement(4614809..4626123)
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AA seq
696 aa
AA seq
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MAIECLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMRYKDLRQYPDFSLISDSGEFTSSL
SCVIITHFHLDHIGALPYFTQVCGYEGPIYMTYPTKALAPLALEDYRNTFERGGEKAQFT
SEHIAECMKKVTAVDLKQTIHVDKDIQIRAYYAGHIHSHRRPSRPDRSERAPTAQSAPRR
RPTYLARLTHVGAKPTSIMATLAPGAFLTTLLHSTPLHPKVLGAAMFYAKVGDASLVYTG
DYNMVPDRHLGAAQIDQLQLDLVISESTYATTYRDSKYVQEREFLKAVHKCVTSGGKVLI
PSNALGRTQELCLLLDDYWERTNLKVPIYFSSGSTIQANLYHKILINWASQNVKDTHARH
NALDFKNVRSFDRSLINAPGPCVLFASPGNLNGGFSLEILKHWAPYKENLVMLPGSCSNG
IIGSKLMSAKIPTQIKLDENVKTDVRCQIHKLAFSAHTDGKGIMDLVTFLLPKHVLLVHG
EKPKMAALKEKIQSELGIECCYPANNETVTIPSTHHIEAGVSDAFLQSCMAPNFMFWKTN
VGSDERTPPILQVHDDRVGQGMLTLQNPRVFTQNELRDVLGVENHQVKFAHCCSAAYDSE
VSNAASDWSPSTSQKNSLLQLLFGLVSGDFPDCIMHDCQKGIQVGSFVASLCSREECPSS
NADALHFRCTWSVTEEELAWKVISLVKNVKLSREST
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggctatcgaatgccttgtgctcggcgcagggcaagaagtggggaagagctgcgtcgtt
gtgacaataaatggcaagagaataatgtttgattgtggaatgcacatgcgctacaaagat
cttcgccaatacccggatttttctttgatttcagattctggtgagtttaccagttcactc
tcttgtgtgatcataacacacttccacttggaccacattggagctcttccatattttact
caagtttgtggatacgagggccccatttacatgacgtatccaacgaaggccttagctcca
ctggcgctcgaggattatcgaaatacatttgaaagaggaggagagaaagcgcaatttact
tctgagcatattgcagagtgtatgaaaaaagtgactgcagtggatctaaaacagactatt
cacgttgataaagacatccagattcgagcctattatgcagggcacattcacagccatcgt
cgccccagtcgccccgaccgctccgagcgcgccccaaccgcccagagcgcgccccgacgg
cgccccacgtatctcgctcggctcacccatgttggggcgaagccgacctcgatcatggcg
accctcgccccgggcgcgtttttgacaacactgctacatagtactcccctccatcccaag
gttcttggggctgcaatgttttatgccaaagtgggtgatgcctctttggtatatacaggt
gactataatatggtgcctgatagacatcttggtgcagctcaaattgaccaactgcagcta
gaccttgttatatccgagtcaacttatgcaacaacataccgtgattcaaaatatgtccaa
gagagggaatttctaaaagcagttcacaaatgtgttactagtggaggcaaggttctaatt
ccttcaaatgctcttgggaggactcaggaactgtgtttgctattagatgattattgggag
cggacaaaccttaaggtgccaatatacttctcttcaggttcgactatacaagcaaatctg
taccataaaattctcatcaattgggcaagccaaaatgtcaaggatactcatgctagacac
aacgcattagacttcaaaaatgtcaggagttttgatcgttccctgataaatgctcctgga
ccttgtgtcctttttgcttcaccgggaaaccttaatggtggcttttctttggaaattctc
aagcactgggctccatacaaagagaatcttgtcatgctaccaggatcttgttcgaatgga
attataggaagcaagttgatgtcagccaagataccgacacaaatcaagcttgatgagaat
gtcaaaaccgatgtgcgatgccagattcataagttagcttttagtgctcataccgatggc
aagggaatcatggaccttgttacgtttctcttgcctaagcatgtgctgcttgtacatgga
gaaaagcctaagatggctgcgcttaaagaaaaaatccagtctgaattgggaattgaatgc
tgttatccagcaaacaatgaaactgtgaccattccttcaactcatcacatagaagccggt
gtgtctgatgcatttctgcagagttgcatggcccccaatttcatgttttggaaaaccaat
gttggctcggacgagagaacacctcctatattgcaggttcatgatgaccgagtgggtcaa
gggatgttaaccctgcagaatcctagagtctttactcaaaacgaattgagggacgtgtta
ggagtagaaaatcatcaagtgaagtttgctcattgttgctcagcagcatatgattcagaa
gttagcaatgctgcatcagattggtcgccttcaacgtctcaaaagaattctttgctgcag
ctgttgttcggattagtttccggagattttcctgattgtattatgcatgattgccaaaag
ggcattcaggttgggtcgtttgtcgcctctttgtgctcgagggaagaatgcccgagcagc
aacgctgatgcactacattttcgctgtacatggtctgtgactgaagaggaacttgcttgg
aaagttatttcactagtgaagaatgtcaagttgagcagggaaagcacttga
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