Salvia splendens (scarlet sage): 121760357
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Entry
121760357 CDS
T07627
Name
(RefSeq) N-glycosylase/DNA lyase OGG1-like
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121760357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121760357
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
121760357
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121760357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
121760357
NCBI-ProteinID:
XP_042011973
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All DBs
Position
2:7028431..7030509
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AA seq
387 aa
AA seq
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MKRPKSPLPPSPSTPPPPLHCQSFTKLITSVSTKRRNILQNPLPFPTAAAEIKWKPLNIS
KSELYLPLTFPTGQTFRWKKTWPLQYTGPIGPHLVSLKQLDDNGVGYFCHFTDDEDRART
ELFDFLNMGVSLNSIWDEFRAADSRFAELALHLEGARVLRQDPLECLIQFICSSNNNIQR
ITKMVDFISSKGRFLGNVGEFEFYEFPSIEKLALLSEAELRDAGFGYRAKYIVGTVAALQ
SKPEGGQEWLASLRKLDLQESVGGLSSLPGVGPKVAACIALFALDHHHAIPVDTHVWKIA
TRYLLPELAGTSLTPRICSRVADAFVSKYGKYAGWAQTLLFISELPSQKAMLPPSAWETD
KEEARSRFKSKARQYKKHRESPAAKEN
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaccaaaatctcccttgcctccgtccccttcaacccctccaccgccgcttcac
tgccaatccttcacaaaactcatcacttccgtttccacaaaacgccgcaacattctccaa
aatcccctgccattccccaccgccgccgccgagatcaaatggaaacccctcaacatcagc
aaatccgagctctatctaccgctcacgttccccaccggccagacgttccggtggaagaaa
acctggccgctgcagtacacgggcccaatcgggccccacctcgtctccctcaagcagctc
gatgacaacggcgtggggtatttctgtcatttcacggacgatgaggaccgcgcaaggacc
gagcttttcgattttctgaacatgggcgtttcgctgaattcgatttgggacgaatttagg
gctgccgattcgaggtttgctgagctggcattgcatttggagggggctagggttttgcga
caggatcccttggaatgtctgattcagtttatttgctcctcgaataataatatacagagg
attacgaaaatggttgatttcatctcgtccaagggaagatttctggggaatgtgggagaa
ttcgagttttacgagtttccgtcgattgaaaagctggcgctgctgtcggaggccgagctt
cgagacgctggttttgggtacagggctaaatatattgttggcactgttgcggctttgcaa
tcgaagcctgaagggggtcaggagtggcttgcttctcttcgtaaactagatcttcaagag
tcggttggcggtctctcaagtttacctggtgttggcccgaaggttgctgcgtgcattgct
ctttttgctttggatcatcatcacgcaattcctgttgatactcatgtgtggaagatcgcc
accaggtatctccttcctgaactggcaggcaccagcttgacaccacgaatctgcagtcgt
gttgcagatgcttttgtgagcaaatatgggaagtatgctggatgggcgcagaccctgctt
ttcatctccgaactcccttctcagaaagctatgttgccaccaagcgcctgggagactgac
aaagaagaagctcggtcgagattcaagtcaaaagcgaggcagtacaagaaacatagggaa
tcccccgcagcaaaagaaaattga
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