Salvia splendens (scarlet sage): 121760434
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Entry
121760434 CDS
T07627
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121760434
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121760434
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
121760434
NCBI-ProteinID:
XP_042012035
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Position
13:complement(30629257..30631392)
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AA seq
402 aa
AA seq
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MGLSFFFLLFTFFLPSLIASSPTLKDPELVVQEVHRKLNASRRKLGFLSCNTGNPIDDCW
RCDSNWEKNRQKLADCAIGFGKNAIGGRDGKIYVVTESGGDDPVNPKPGTLRHAVIQDEP
LWIIFARDMVIQLKEELIMNSFKTIDGRGASVHIANGPCITIQGVTNIIIHGIHIHDCKQ
GGNAMVRDSPQHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCKDGLIDAIHGSTAITISN
NYMTHHDKVMLLGHSDSYTQDKGMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
MYAIGGSADPTINSQGNRFLAPNDRFSKEVTKHEDAPESQWKSWNWRSEGDLMLNGAYFT
PSGAGASSSYAKASSLGARPSSLVSSITAGAGSLNCRKGSHC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggactatcattctttttcctcttgtttacattcttcctcccatctctcattgcctca
tctccaacactcaaagaccctgagctagtagtccaagaagttcataggaaattgaatgcc
tcgaggaggaaattggggttcctgtcctgcaacactgggaaccccatcgatgactgttgg
cggtgcgactccaactgggagaaaaaccgccagaagctggccgactgcgcgatcggattc
ggaaagaacgccatcgggggcagggacggaaaaatctacgtcgtgacagaatccggcggc
gacgaccccgtgaacccgaagcccgggacgctccgccacgcggtcatccaagacgagccg
ctatggatcatattcgcgcgcgacatggtcatccaattgaaggaggagttgatcatgaac
tctttcaagaccatcgatggtaggggcgctagtgtgcacattgccaatggtccatgcatc
accatccaaggtgtgaccaacatcatcatacatggcatccacatacatgattgcaagcaa
ggcgggaatgctatggtgcgggactccccacagcactacgggtggaggaccatatcggac
ggcgacggcgtgtcgatctttggcgggagccacgtgtgggttgatcattgctcactctcc
aactgcaaagatggcttgattgatgccatccatgggtccaccgccattaccatatcaaac
aattacatgacccatcatgataaagtcatgcttttgggacatagtgactcatacacacaa
gataaagggatgcaagtcaccattgccttcaatcactttggtgaagggctagttcaacga
atgccgagatgcagacacggatacttccatgtggtcaacaatgactatacacattgggag
atgtatgccattggtgggagtgcggatcccacaattaatagccaaggcaatagatttctt
gcaccaaatgatagattcagcaaagaggtgaccaaacacgaggacgcgcccgaaagtcag
tggaagagttggaattggagatccgaaggggatctaatgttgaacggcgcgtatttcacg
ccgtcaggggctggggcgtcgtcgagctatgctaaagcgtcgagccttggcgcccgaccg
tcgagcctagtcagctcgatcacggctggagccggtagcctgaattgtcggaaggggtcg
cattgttga
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