Salvia splendens (scarlet sage): 121760453
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Entry
121760453 CDS
T07627
Name
(RefSeq) tRNAse Z TRZ4, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sspl03016
]
121760453
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
121760453
Transfer RNA biogenesis [BR:
sspl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
121760453
Prokaryotic type
121760453
BRITE hierarchy
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GFIT
Motif
Pfam:
Lactamase_B_2
RT_RNaseH_2
RT_RNaseH
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
121760453
NCBI-ProteinID:
XP_042012048
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Position
13:9400313..9405445
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AA seq
673 aa
AA seq
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MNMINRQLAQLANSMGELQGNSGKLPSIVHVPEKANVSKKTSGEPSGTKLLRDVASEEEL
NKPLPQIQDPFFLDETLLAKDETKGVLPKEDPPKETEPMKETPAQNVPKRDSGKAGEEPK
SEFIGAAGAQLPASTEELSDGELEKEGDTARSLLPTDTLPPQVELKKLPANLKYAFLGEK
DSYPVIISSSLTKEHHIKLEEGAKAHRDSQRKVNPKMWEEILKEILKLLSLRIIFSVPDS
EWAQRNYDTTKKEMLAVVYSFEKFWQYLLGSKMLAENLLKFHLRPYANMGLDRSSIPKLT
SHSEIIQELLSEIPEARDASKNVTRLLSGCASVTEEPWLLEDVVPSCLEYITREDMEIVL
LGTGSSQPSKYRNVSSIFINLFSKGSILLDCGEGSLGQLKRRFGVQGADEAIKGFKCIWI
SHIHADHHTGLASILARRHDLLKGSPHEPTLVVGPYQLNWFLSAYQKLEDLDLRFLDCSH
TTEDALEAFDSNEGNPSKGVDSSLCKILGELGLEALVSFSVIHCPGAYGVVLQAASRINS
AGKTIPGWKVVYSGDTRPCPKLVWAARRATVLIHEATFEDGMMDEAVSKKHSTTIEAVEI
GNSAGTYRIILTHFSQRYSKIPVFNEAHMHKTCVAFDMMSVNLADVHALPRVLPYLKVLF
RDEITIADDSEDV
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgataaataggcaattggcccagctggcgaattccatgggtgaattgcaaggc
aattcagggaaactcccgtctatagttcatgtgcctgaaaaggcaaacgtgagcaagaaa
actagtggagagcctagtgggacaaagttactgagagacgttgcctcggaagaagagctc
aacaaacctctgcctcagatacaagatccgtttttcttggatgaaacactattggcaaag
gatgaaaccaaaggcgtactgcccaaggaagaccctcctaaagaaacagaacccatgaaa
gaaactccagcccagaatgtgcccaagagagactccggaaaggctggggaagaaccgaaa
tcagaatttattggagccgcaggggctcaactaccagccagtacagaggaactttcagat
ggtgagttagaaaaggagggggatactgcaaggagccttctacccacagacacacttccc
ccacaagttgagttgaagaaactaccagcaaacctgaagtatgctttcctcggggagaaa
gactcatacccggtgattatcagcagcagccttacgaaagagcatcacatcaagctagaa
gagggagcaaaagcacatcgagactcgcaaaggaaggtgaaccctaaaatgtgggaggag
atattgaaggaaatcttgaagttgctgtcgttgagaattatcttttcggtgcccgatagc
gagtgggctcaaaggaattatgacaccactaagaaggagatgttggccgtggtgtattca
ttcgagaagttttggcagtacttgttaggatccaagatgttggctgagaatcttctcaag
tttcatctgcgtccctatgcgaatatggggctcgacagatcaagtataccgaaactaaca
tctcattccgagatcattcaagagctattgtcagaaattccggaggctagagacgcctcc
aagaatgtgacccgtttattgtcgggttgcgctagtgtgaccgaggaaccatggttgctc
gaagatgttgtccctagctgtctcgaatatataaccagagaagatatggagattgttctt
cttggtaccggttcttcgcaaccctcaaagtatcgaaacgttagttcgattttcatcaat
ttattttccaaaggaagcatactcttagactgtggtgaaggaagcttgggacagctaaag
agaagattcggagtccaaggtgcggatgaagctataaaaggtttcaaatgcatctggatt
tcgcacatccacgctgatcaccacacgggccttgcaagtatccttgctcgacgacatgat
ctgttgaagggatcaccacacgagcccacccttgtcgttggcccgtatcagctaaattgg
tttttgagcgcctaccaaaagctcgaggatctggacttgcggtttctcgactgctctcat
acaactgaagatgcattggaggcttttgattcaaacgaagggaaccctagcaagggcgtc
gattcatctctgtgcaagattctcggagaacttggattggaagcgctggtgagcttctct
gtcattcattgtcctggagcttatggcgtcgtgctgcaggctgcgagcaggatcaacagt
gccggtaaaaccattcccgggtggaaagtcgtctactcaggtgacaccagaccttgcccg
aaacttgtttgggctgcccgccgcgcgaccgtgctcattcacgaggcgaccttcgaagac
gggatgatggatgaggcggtgtctaagaaacacagcacgacgattgaggcagtggaaata
gggaattctgcgggcacgtataggatcatactgactcatttcagccagagatactcgaag
atcccggtgttcaatgaagcgcatatgcacaaaacgtgcgtcgcgtttgacatgatgagt
gtcaacttagcggatgttcatgcactgccaagagtgctgccatatctcaaagtcttgttt
agagatgaaataactattgctgatgactctgaagatgtgtaa
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