Salvia splendens (scarlet sage): 121761488
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Entry
121761488 CDS
T07627
Name
(RefSeq) cell division control protein 48 homolog C-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121761488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121761488
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121761488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_14
AAA_22
RNA_helicase
AAA_5
nSTAND3
ATPase_2
Rad17
AAA_28
AAA_2
ABC_tran
CPT
AAA_33
AAA_18
NPHP3_N
NACHT
NB-ARC
Zeta_toxin
Bac_DnaA
TsaE
IstB_IS21
nSTAND6
KAP_NTPase
Mg_chelatase
AAA_17
AAA_7
DUF815
TIP49
AAA_23
AAA_24
Viral_helicase1
Parvo_NS1
SMC_N
RsgA_GTPase
AAA_21
PIF1
tRNA_lig_kinase
Motif
Other DBs
NCBI-GeneID:
121761488
NCBI-ProteinID:
XP_042013065
LinkDB
All DBs
Position
13:3286456..3293706
Genome browser
AA seq
749 aa
AA seq
DB search
MGSSHRETPISGEQLSMAGLSDRIAKCLLQCQDQTLRCLIESAAAGAKNLSDAQIVQLIC
STFPLTFSHPNRNLLIERVAKITPLWCRRVSAVDEPAAKRPKFDQSWNANRQIEVAKASA
SASYSDSNGQELDSARSYRFGGCGRDKDANEDNMAIIGDFVQGNKLGVSMTEVKKNEVKW
PMFRDIGGLYYILDCLKEEVIAPMFQMKLLCHFGCKPTTAILLHGPPGCGKTMLARAIGN
ETRVPFYETSAVSLKSGVSGIQELFRRAYKNAPSIVFIDEIDALNSETESLFRCPVKHLI
ACMKEPVNDGSDSERFNIGRDGYVLTIGATNKTDALDLALRQRFDDEYLLNVPSEIERHG
ILTVLTRNDKFEDGSDLGKVAKFTQGYVAGDLVELVNKARMIAFKDVFYSRTCRRDFEDM
YEAYGIPFSDEQIEEFVLTLECFMEANDKVQPSAEMEDFSPTPYKNWDDVGGLQLLKLEL
ERRIVKLIKFPQVYEFLRESGVKNLPTSFFLYGPSGCGKTSIVEALAKEAGANFMHIKVD
ELLNLTWPEVLVENIFKRAKSQPPCVVLFDELDLHNLTDKDLERDKDAWKSEIYDLIECY
ISDIRKESRVYVIVTSSRLENLERISLIKEDFGRILYAPLPTPEERGEILKILARNKPID
PEVDLMALGKDAACENFSGSDLFALVAEASKFAIDRPLLSCGGNMTIKNEDFEAALAEVS
PSLSAKERNKWALHAKKIDVAHGASALDW
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgggctccagtcaccgggaaactcctatttccggcgaacaattgagcatggccggatta
agcgaccgaatcgccaagtgtctccttcaatgtcaagaccaaactctgcgctgtctcatc
gagtccgccgccgccggagccaaaaacctcagcgacgcgcaaatcgtgcagctcatctgc
tccaccttccctctgacattctcccaccccaaccgcaacctcctaatcgaacgcgtcgcg
aaaatcactccgctctggtgcaggagagtgagcgccgtggacgagccagcagcgaaaagg
ccaaaatttgaccaaagttggaatgcgaatcggcaaattgaggtagctaaggcttctgct
tcagctagttattctgattctaacggtcaggaacttgattctgctaggagttatagattt
ggtggttgtgggagggataaggatgcgaatgaggataatatggcgataattggggatttt
gtgcaaggaaataaattaggggttagcatgacagaggtgaagaagaatgaggttaagtgg
ccaatgtttagggatattggtgggctgtattatatattggactgtttgaaagaggaggtg
attgccccgatgttccagatgaagctactgtgtcactttggatgcaaacctacaaccgca
attctgttacacggtccaccgggctgtgggaaaaccatgcttgctcgagccattggcaat
gagacccgagtgccgttctatgaaacgtctgctgtttcgttgaagtctggagtttcaggt
atccaagagttgttccgcagagcatacaagaatgcaccatctattgtgttcattgatgaa
attgatgcattgaattcagaaacggaaagcttgttccgatgcccagtaaaacatttgatt
gcttgcatgaaggaacctgtgaatgacggttctgattctgaaagatttaatattggacgc
gatggctatgtgctgacaattggagcaaccaataagactgatgctcttgaccttgcctta
aggcagcggtttgatgatgaatatcttttaaatgttccaagtgaaattgaacggcatggc
atactaacagttctaacacgtaatgataagtttgaagatggttccgatcttgggaaggta
gcaaagtttactcagggttatgtagcaggagatttggtagaactagtaaataaggctcgt
atgattgctttcaaagatgtcttttattcgagaacttgcagaagggattttgaagacatg
tatgaggcttatggaataccattttcagatgaacaaatagaggagttcgtattaaccttg
gagtgttttatggaagctaatgataaggtacaaccaagtgctgaaatggaagattttagc
cccacaccatataaaaactgggatgatgttggaggccttcaattgttgaaattggaactt
gaacgccgcatagttaagcttataaagtttccacaggtttatgagtttcttagggaaagt
ggggtgaagaacttgccgacctcctttttcctttatggtccttcgggttgtggaaagaca
tcgattgtcgaggctttagctaaagaagcaggagcgaatttcatgcatatcaaggtggat
gaacttttgaatttgacgtggcccgaggtgcttgtggaaaatattttcaaacgtgcaaaa
agtcagcctccatgtgtagttttatttgatgagttggacctacataatctcacagacaaa
gatctagagagggacaaagatgcatggaagtcggagatatatgatctgatagaatgttat
atcagtgatataagaaaagaatcgcgtgtttatgtgattgtaacatcaagtaggctagag
aatctggagcgtatctcgctcatcaaagaagattttggtaggattttgtatgctcctctt
cctactccagaagaaagaggagagatattgaagattcttgctcgaaacaagccaatagat
cccgaagtggatctgatggctctaggaaaagacgccgcttgtgaaaatttcagtggctct
gatctatttgcattggtggcagaagcttctaagttcgccattgatcgaccattattgtcc
tgtgggggtaacatgaccatcaaaaatgaagattttgaggctgcgttggctgaagtctcc
ccttctctctcagccaaggaacgcaacaaatgggcgctacacgcaaagaagattgatgtt
gctcatggcgcatctgcgctggactggtag
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