Salvia splendens (scarlet sage): 121761735
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Entry
121761735 CDS
T07627
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121761735
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sspl01002
]
121761735
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121761735
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121761735
Peptidases and inhibitors [BR:
sspl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121761735
Ubiquitin system [BR:
sspl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121761735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
RA_2
TRAF_BTBD17
ubiquitin
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
121761735
NCBI-ProteinID:
XP_042013293
LinkDB
All DBs
Position
13:complement(26792795..26805419)
Genome browser
AA seq
1125 aa
AA seq
DB search
MTMMTPQPLDQQEDEEMLVPHSDLVEGPQPLVEGPQPMEVAPGDNDNAGSVENQANEEPQ
ASRYTWTIENFSRLNMKKLYSDVFTVGGYKWRVLIFPKGNNVDYLSMYLDVADSATLPYG
WSRYAQFSLAIVNQMHNKLTVKKDTQHQFNQRESDWGFTSFMPLSDLYDPNKGYLMNDTC
IVEADVAVRKVIDYWAYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTT
ENDIPTGSIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKL
EDKMKGTVVEGTIQKLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKY
VEVERLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEF
PLELDLDRDNGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLTDQWYKFDD
ERVTKEDVKRALEEQYGGEEELPQTNPGYNNSPFKFTKYSNAYMLVYIRVSDKEKIICDV
DEKDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLREQIGKDIYFDLVDHD
KVRNFRIQKQMPFNLFKEEVAKELGIPVQFQRFWIWAKRQNHTYRPNRPLTTQEEAQTVG
TLREVSNKAHNAELKLFLEVERGPDLQLVPPPEKIKEDILLFFKLYDPHKEELRYVGRLF
VKSNGKPIEILTKLNELAGFAPDQEIELFEEIKFELSVMCERLDIRASFRFSQIEDGDII
CFQKSPPPETDVQVRFPDVPSYLEYVKNRQIVHFRALERPKEDEFCLELAKNHTYDDVVE
RVAQHLSLDDPSKIRLTPHNCYSQQPKPNPIKYRSVDHLIDMLIHYNQISDILYYEVLDI
PLPELQCLKTLKVAFHHATKDEATILNIRLPKPSTVGDVLNEIKTKVELSQPNAELRLLE
VFYHKIYKIFPTHEKIENINDQYWTLRAEEIPEEEKNLGQNNRLIHVYHFTKETAQNQVQ
VQNFGEPFFLVIHEGETLAEVKARIQKKLQVPDEEFSKWKFAFLSLGRPEYLEDSDIVST
RFQRRDVYGAWEQYLGLEHSDTTPKRSYNASQNRHTFEKPVKIYN
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgatgactccgcagccattggatcagcaggaagatgaagagatgctggttccg
cactcggatttagtggaaggtcctcagcctttagttgaaggtcctcagccaatggaagtg
gcaccaggcgacaatgacaatgcgggaagtgtggagaaccaggctaatgaagaaccacaa
gcatcacgttacacatggacaattgagaacttttctcgactgaatatgaagaagctgtat
tcggatgtcttcactgtcggaggttataaatggcgagtgctcatatttcctaagggaaac
aacgtggactacttgtcgatgtatttagatgtggctgattcggctaccttgccttatggg
tggagtagatatgcacagtttagcttggctatagttaatcaaatgcataacaaacttaca
gtcaagaaagacacacagcaccagtttaatcaaagggagagtgattggggtttcacatct
ttcatgcctctcagcgacctttatgatcccaacaaggggtacctaatgaatgatacttgc
atagttgaagctgatgttgctgtacgtaaggttattgattactgggcatatgactcaaag
aaggagacaggttacgttgggcttaagaaccagggggcaacttgttacatgaactctttg
ctgcagactttgtaccatattccttatttcagaaaggctgtatatcatatgccaactacg
gagaatgacatccctactggaagtatccctctggcgttgcagagtttattctataagctc
caatacaatgacaccagtgtggctacaaaagaattgactaaatcatttggatgggacact
tatgattcattcatgcaacatgatgttcaagaacttaacagagtcctatgtgagaagctt
gaagacaagatgaagggaactgttgtcgaaggaacaatacagaagttatttgaaggccat
catatgaattatattgaatgtatcaatgtggacttcaaatcaaccagaaaagaatcattt
tatgaccttcaacttgatgtaaaaggttgcaaggatgtttatgcttcatttgacaagtat
gtggaagtagaacgccttgaaggagataataaataccatgctgaggaacatggtttgcag
gatgccaagaagggtgtcttgttcattgactttcctccagttctacagctccagttaaag
cgatttgagtatgattttatgagagatacgatggtgaagattaatgatcgctatgaattt
ccattagagcttgatcttgatagagataatggcaagtatttatcaccggatgctgacagg
agtgtacgaaatctttacacacttcatagtgtcttggttcacagtggtggggtacacggt
ggacattattatgccttcatcaggccaactcttactgatcaatggtataaatttgatgat
gagagggtcaccaaagaagatgtgaaaagggcactagaagagcagtatggtggtgaggag
gagttgccacagacaaatcctggttacaataacagtcctttcaaattcaccaaatactcg
aatgcatacatgcttgtgtatatacgcgtcagtgacaaggaaaaaataatctgtgatgtg
gatgagaaggacattgctgagcatcttaggataaggctgaaaaaagaacaagaagaaaaa
gaagataagagaagatacaaagcacaggctcacctttacacaattataaaggttgctcga
gatgaggatctgagggaacagattggaaaggatatctattttgaccttgttgatcatgat
aaagtccgtaatttccgaatccagaaacagatgccttttaaccttttcaaggaagaggtt
gccaaagaacttggtataccagttcaatttcagcgcttttggatttgggcaaaaagacaa
aaccatacttaccgcccaaaccgaccattgacaacccaggaggaagctcaaacggtagga
acgctgcgggaagtatcaaataaagcccataatgcagagttaaagttgttcttggaagtg
gagcgtggaccggatttacaactggttcctcctccagaaaagattaaggaagacatattg
ctattctttaaactctatgatcctcataaagaagagctccgatacgttgggaggcttttt
gtaaaaagtaatggcaagcctattgagatcctaacgaagctaaatgagttagccgggttt
gctcctgatcaagaaattgaactttttgaggaaatcaaatttgagctttctgttatgtgt
gaacgtcttgatatacgcgcttcatttcgattcagtcagattgaagatggagacattatc
tgcttccagaaaagtccaccccctgaaactgatgtgcaagttcgatttcctgatgttcct
tcatatctggaatatgtgaaaaatcgccagattgtccactttcgagctttagagaggcca
aaggaagatgaattttgtctggagttggcaaagaaccacacttatgatgatgttgtggaa
agagtagcccagcaccttagcttggatgatccttctaaaatccggcttactcctcacaat
tgctactctcagcaaccaaagcccaatcctatcaaatatcgatcagttgatcatttgata
gacatgcttatccactacaatcagatatcagatatactctactatgaagtcctggacatc
cctcttccagagttgcagtgcctgaaaactctaaaggttgcattccatcatgcaacaaag
gatgaggctacaatcctcaacattaggctgcctaaaccaagtactgtcggagatgtgctc
aatgaaattaaaacaaaggtagagttgtctcagccaaatgctgaacttaggctgcttgaa
gttttctatcacaagatatacaagattttccctacccatgagaagattgagaatataaac
gatcaatactggacgttacgtgcagaggagattccagaagaagaaaagaacttggggcaa
aataatcgattgattcatgtttaccatttcacaaaggagactgcacagaatcaagtgcaa
gttcagaatttcggggaaccattctttttggtcatccacgaaggagagacattagcagag
gtaaaagcgcgaattcaaaagaaattgcaggtcccagatgaagagttttctaagtggaag
tttgcctttttatcattgggacgcccagagtatctagaggattccgacattgtgtcaacc
cgttttcagagaagagatgtatatggtgcctgggagcagtacctggggttagagcactca
gacacgacccccaaaaggtcttataatgcaagccagaatcgccacacatttgagaagcca
gtaaaaatatacaattaa
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integrated database retrieval system
