Salvia splendens (scarlet sage): 121761828
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Entry
121761828 CDS
T07627
Name
(RefSeq) probable replication factor C subunit 3 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03030
DNA replication
sspl03410
Base excision repair
sspl03420
Nucleotide excision repair
sspl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121761828
03410 Base excision repair
121761828
03420 Nucleotide excision repair
121761828
03430 Mismatch repair
121761828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121761828
03036 Chromosome and associated proteins [BR:
sspl03036
]
121761828
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121761828
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121761828
DNA Replication Termination Factors
ELG1-RFC complex
121761828
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121761828
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121761828
Check point factors
HRAD17(Rad24)-RFC complex
121761828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
Nucleo_P87
nSTAND3
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
121761828
NCBI-ProteinID:
XP_042013442
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All DBs
Position
13:4759774..4764163
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AA seq
284 aa
AA seq
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MINEDTTMASQKPLRERDFEPLPMLPLSPLNEPLLESLPHTLPQITQPKVLSFPSPPPTP
LSESQSAPTSPMVLQSPAPAHQTPSTGGVRHENQETNTNEYEREYIWAEKYRPLHLQDFL
CNRKAALELQAVVRNLHEKGEDCGHFIFEGNPGVGKRTMICALLREAFGPDKVQAKEERK
EFHFKGEAEESIHVSLMVSPQHTEVNLSELKGYAKHVILELINEKNQNSDKVLHSNLGNS
RAIILYEADKLSTDSLLYMKWMLEKFKGFNKVFFCCSDASNLSL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgataaatgaagatactactatggcttcccagaagcccttgagggagagagactttgag
ccactaccaatgctgccactgtcaccactaaacgaacctctactcgaatcattaccacat
acactacctcagataacacaaccgaaagtactatcatttccctcaccaccgccaacacca
ctctcagaatcacaatctgcaccaacatcaccgatggttttacagagtccagcaccagca
catcagactccatccaccggaggagttagacatgagaaccaggagacaaacacaaatgaa
tatgaaagagagtatatctgggcagagaagtataggcctctacacctgcaggattttcta
tgcaacaggaaagctgcacttgaactacaggcagtagtaagaaatcttcatgaaaaagga
gaagactgtggtcacttcatatttgaaggcaacccaggagtaggaaagagaaccatgatt
tgtgctttgcttagggaagcttttggaccagacaaagtgcaggcaaaagaagaacgcaag
gaatttcacttcaagggagaagcagaggagagcatccacgtaagcttaatggtatcacct
caacatactgaagtcaacctttctgaactcaaaggttatgcaaagcatgtgatacttgaa
cttatcaatgagaaaaatcagaattctgacaaagtattgcacagcaaccttgggaacagt
agagctattatcctatacgaagcagacaagctatcaactgattccctgttgtatatgaaa
tggatgctagagaagttcaaaggatttaacaaggtattcttctgctgtagtgatgcctca
aacttgagtctataa
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