Salvia splendens (scarlet sage): 121761869
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Entry
121761869 CDS
T07627
Name
(RefSeq) E3 SUMO-protein ligase MMS21-like isoform X1
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121761869
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121761869
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
121761869
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
121761869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-Nse
zf-RING_UBOX
zf-ANAPC11
zf-MIZ
zf-C3HC4_2
RexA
zf-RING_2
Med18
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
121761869
NCBI-ProteinID:
XP_042013497
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Position
13:29076036..29088504
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AA seq
284 aa
AA seq
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MASASAPRNGVQGRIASAATTLAAENQTLIAEIRRATVMMKEVGVDFEKDNEFDMPSYVL
FGRRNHHMLVSILCDSNYQIVCIVNLALQVKQLEDGVVNLVKAADECTHLSSSIQSIGKD
YQPAAELTNFSKLFDKKIKRSKADVSSVSQSQLWLRQFREAIWKVHHEGQPMPGEEQEDI
IMTSTECTILNATCPLTGKPITELAEPVRSMDCKHIYEKKAIMQHLRTRTAQIRCPVTGC
PKKLVVDRVDCDPFLLMEIDEMRSLNAQRATAGVIEDFTQLEQD
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcctctgctccgcgcaacggtgtacagggaagaattgcgtcggcggctaca
acgcttgccgccgagaaccagactcttattgctgagattagaagggctacagttatgatg
aaagaagttggagtcgatttcgagaaggacaacgaatttgacatgccatcatatgttttg
tttggaagaagaaaccatcatatgttggtaagtatattatgtgattcaaattatcaaata
gtatgtattgtcaatttggcactgcaggtgaagcagcttgaagatggagttgttaactta
gtgaaagctgcagatgagtgtactcatctttcgagcagtatccaatctataggaaaagat
taccagcctgcagctgagctaactaacttcagtaagctcttcgataagaaaatcaaaaga
tcaaaggctgatgtgtcatctgtctcacagagccagttatggttacgacagttccgtgaa
gctatctggaaagttcatcacgaaggacaacctatgccaggtgaagagcaagaggacata
ataatgaccagcacggagtgcactattttaaatgccacctgtccactgacaggaaaacct
atcactgaactagcggaacctgttagaagcatggattgcaagcacatatatgagaagaag
gctatcatgcaacatttaaggacgagaaccgcacagatccgttgcccggtgacaggttgc
ccgaaaaaattggtggtagacagagtggattgcgacccctttttactaatggaaattgat
gaaatgcgatcacttaatgcacaacgtgccacagctggtgtgatcgaagatttcactcag
ctggaacaagattaa
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