Salvia splendens (scarlet sage): 121761990
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Entry
121761990 CDS
T07627
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121761990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121761990
Spliceosome [BR:
sspl03041
]
Common components
Common spliceosomal components
SR proteins
121761990
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_Nup35
RRM_5
Motif
Other DBs
NCBI-GeneID:
121761990
NCBI-ProteinID:
XP_042013636
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All DBs
Position
13:963957..966156
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AA seq
261 aa
AA seq
DB search
MSHFGRSGPPDIRDTFSLLVLNITFRTSADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYQDEAAKAVEKLDGGVVDGREIMVQFAKYGPNAERIDKGRIEEPVYKSKGRSRSR
SPRPRGDDRDRDYRRSSETRSRGRSERESYRGRHRESSYRSRSRSRSRSRSASPGYRRER
GRGKYDDGDRRKRSRSYESASPVRRSLTPRRSPSPNKSPLSRDGSPDVRHAKIERSATPK
SVSPRGRRDSRSPSPHDETDE
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcgggagatctgggccgccggacatcagagacaccttctctctcctcgtc
ctcaacatcactttccgtacttcagctgatgacttgttccccctgtttgataagtatgga
aaggtggttgatgtgttcattcctcgcgaccggagaactggagactccaggggttttgca
tttgtgcgctataagtatcaagatgaggctgcaaaagcagttgaaaagctggatggagga
gttgttgatgggcgagaaataatggttcaatttgctaaatatggacccaatgccgaacga
attgataaaggtagaattgaggaacctgtttacaagtctaaaggcaggtcaagaagccgc
agtccacgcccaaggggtgatgacagggaccgagactacaggaggagcagtgaaactaga
agtaggggaagaagtgagcgcgagtcttatcgtggcaggcatagggaatcttcctatcga
agcaggagtcggtccaggagtcgaagccgtagtgcaagtcctggctatcgcagagaacgt
ggtagaggaaaatatgatgatggcgatagacgtaaacgaagtcggtcttatgaaagtgcg
tctcctgttcgtcggagtctcactcctcggaggtctccttccccaaacaaatcacctcta
tctagggatggaagtcctgatgtgcgtcatgccaaaattgaacgatctgccacccctaag
agtgtctctcctcgcggccgccgtgattctcgtagcccgtctccacatgatgagaccgat
gagtaa
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