Salvia splendens (scarlet sage): 121762268
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Entry
121762268 CDS
T07627
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121762268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121762268
Spliceosome [BR:
sspl03041
]
Common components
Common spliceosomal components
SR proteins
121762268
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
Cucumo_2B
RNA_bind
Motif
Other DBs
NCBI-GeneID:
121762268
NCBI-ProteinID:
XP_042014019
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All DBs
Position
13:3966005..3968490
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AA seq
329 aa
AA seq
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MDGSLCFNFLACAQDTCLSVRKNRYFCHALPFHTTCRSFTFLFLTTLPSHRFPTCFDIDS
CSIRIQWQVLCSLHAKVFFPFLSNVSILFAGVLDVVIVYLASLCYIVQGFCFVYMEDERD
AEDAIRRLDRIEFGRKGRRIRVEWTKQERGSRRPDSTRKSSSSARPSKTLFVINFDPINT
RTRDIEKYFEHYGKISNVRIRRNFAFVQYELQEDATRALEETHLSKFMDRVISVEYAIRD
DDDKRNGHSPDGRGRDTSPDRRNYDRRRSPSPYQRDRGSPDYGHGSVPNSRSERRGSPQY
GRAESPANDRYNSRSPPPPRERSRSRSRS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggatggttctctctgctttaattttctggcttgtgcccaagatacatgtttgtctgtc
cgaaagaatcgatatttctgccatgctctaccattccacactacctgtagatcattcact
tttctattcctcaccactttgcccagtcaccgatttccaacatgtttcgacatagattca
tgttcaattcggatccagtggcaggtgttatgttctcttcatgcaaaagtttttttccct
ttcctctccaatgtctccatcttatttgcaggggttttggatgttgtaattgtttaccta
gcatcattatgttacattgtgcaaggcttctgctttgtctatatggaagatgagcgggat
gcagaggatgcgatccggaggcttgacaggatagagtttggcagaaaagggcgcagaatt
cgtgttgagtggaccaagcaagagcgtggtagcagaaggcctgatagcaccagaaaatct
tcttccagtgcacgaccttctaaaacgttatttgtcattaactttgatcctatcaatact
aggaccagggacattgaaaagtattttgagcattatgggaagatatccaatgtcaggatc
agaaggaactttgcctttgtgcagtatgagttgcaggaagatgcaacccgagcattagag
gaaactcacttaagcaagttcatggatcgagttatatcagttgaatatgcaatccgggac
gatgatgacaaaagaaatgggcacagccctgatggaagaggacgtgacacgtctcctgat
agaagaaactatgatcgcagacgttccccaagtccctatcaaagagataggggtagccct
gactatggacatggatctgtaccaaattctagatcagaacgaaggggcagtcctcaatat
ggaagagcagaaagccctgccaatgatagatacaacagtcgttcacccccgcctccacgg
gagaggtctcgatcacgatcccggtcttga
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