Salvia splendens (scarlet sage): 121762389
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Entry
121762389 CDS
T07627
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121762389
04121 Ubiquitin system [BR:
sspl04121
]
121762389
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121762389
Membrane trafficking [BR:
sspl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121762389
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121762389
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
Prok-RING_4
zf-RING-like
Rad50_zn_hook
RING_Ste5
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
121762389
NCBI-ProteinID:
XP_042014191
LinkDB
All DBs
Position
13:32044962..32046656
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AA seq
394 aa
AA seq
DB search
MSSTYWCYRCNRFVRVWTQGSVSCPDCSSGFVEEIEAPNRSSLSDSRRRRFPAAAMYMMR
TPDSGPGSGSGSATGSSPRLRRSRRNGGDRSPFNPVIVLRGPNEGGGGAAAGAAGAGFEL
FYDDGAGSGLRPLPASMSEFLLGSGFDRLLDQLAQIETNGIGRIDSNPPASKAAIESMPT
IDISDDHVDIESYCAVCKEAFEVGGEAREMPCKHLYHQDCIMPWLSLRNSCPVCRHELPT
DNESVGAGAGQDVSEGNRANEVGNDDETVGLTIWRLPGGGFAVGRFSGGRGGGERELPVV
YTEMDGAFNNNGAPRRISWGSRGSISRERSGLRRVLNRLFACFGRGGSSTSTASSDSRMS
RRSGSGSLSSVFSSTSRQRRGWGFEVNDGSERRW
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaacctactggtgctacagatgtaaccgcttcgtgagggtttggacccagggc
tccgtcagctgtcccgattgcagcagtggattcgtcgaagaaattgaggctccgaacaga
tcctcgctctccgactcccgccgccgccgcttccccgctgcggcgatgtatatgatgcgg
acgcctgattcgggccccggctcggggtccggatccgccacggggtctagcccgaggctg
agacggagccgcaggaatgggggcgatcgctcgccgtttaatccagttattgttcttcgc
gggccgaatgagggcggcggcggagctgccgccggagctgccggagcaggatttgaattg
ttctacgacgatggtgcgggatcgggtctacgaccgctgccagctagtatgtcggagttc
ttgctgggttctggtttcgataggttgctggatcaattggctcaaattgagactaatggg
attgggagaatcgacagcaatccgccagcgtcgaaggctgccatcgagtctatgccaacg
attgatatctccgacgatcatgtggatattgagtcgtattgcgcggtctgcaaagaggct
tttgaggttgggggtgaggctcgcgagatgccctgcaagcatttgtatcatcaagattgt
attatgccgtggctgtcgctgagaaattcgtgccccgtgtgtagacatgagctgccgact
gacaatgagagtgttggtgctggtgctggtcaggatgtcagtgaagggaaccgagcgaat
gaggtcgggaatgatgatgagacggttggcttgacgatatggagactgcccggtggcggg
tttgcggtggggaggttttcgggcgggaggggagggggagagagggagttgccggtggtt
tacacggagatggacggggccttcaataacaatggggcaccgaggaggatttcgtggggt
tctagaggtagtatttcgagggagaggagtggattgaggagagtcttgaatcgtttgttt
gcgtgttttggcagaggtggatcttcgacttctactgccagctccgactctaggatgagt
aggaggagcggcagtggctcgctgtcatcagtatttagttctacgtcgaggcagcgtaga
ggatggggttttgaagttaatgatggcagtgaaaggagatggtga
DBGET
integrated database retrieval system
