Salvia splendens (scarlet sage): 121762440
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Entry
121762440 CDS
T07627
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
121762440
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
121762440
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
NOMO_3rd
Motif
Other DBs
NCBI-GeneID:
121762440
NCBI-ProteinID:
XP_042014251
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Position
13:3255510..3262574
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AA seq
676 aa
AA seq
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MLHIIFLMFYGFVRCFVKQPAAIYIILSLWLLRLDKMSGNGDLELRIHEHHIVIDNGILK
LTLSKPGGLIRAIRYNGIDNLLELRNEELNGGFYDLNWSEEGANKTRGQFDVIQGKHFSV
VVENENQVELSFTRPWDPSVQGKQSPLSIDRRFVMLRDHPGFYSYAIFEHAEDFPGFNLN
TARIAFMLRKDKFHYMAVADNRQRYMPRPEDRLPGRGQNLSYPEAVLLVDPVEPEFKGEV
DDKYQYTLENKDNKVHGWICFDPPVGFWQITPSNEFRNGGPFKQDLTSHVNPTTLAIFGT
SHYAGVDLLLKFKDGEVWKKVFGPVFIYLNSVPEGEDPISLWNDAKEQMKKEVEAWPYDF
PASEDFPKSHQRGEVRGKLLVYDRYINEDKVPARAAYVGVAPQGDTGSWQRESKRYQFWT
TTDEKGYFSIPNIRAGDYNLYAWVPKFIGDYKYEVALNITPGSFIDVGELTFEPLRDGPT
LWEIGIPNRTAAEFYVPDPNPMYINKLYVNHPDRFRQYGLWERYADLYPDKDLVYTVGVS
DYTKDWFYAQVTRKIGDNEYTGTTWQIKFSIDWLIEGGIYKLRLALASVHNSNLQVRVND
ASANPPLFSTGEIGGDNAIARHGIRGIYWLFSVDIPAVQLIPGENTIYLTQTKSESPFQG
IMYDYIRLEGPYHIDS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgctacacattatttttcttatgttttatggttttgttagatgttttgtgaagcaacct
gcagcaatatatattatcctcagcttgtggctattaaggctggataagatgtctggaaat
ggggatttggagttacgcattcacgagcatcatatagtaattgacaatggaatacttaag
ctcactctgtcgaaaccggggggacttatcagagccatacgatacaatggaatcgataat
ttgctcgaacttcgtaatgaagagctcaatggcgggttttatgacctcaattggagtgaa
gaaggggctaacaaaacaaggggacagtttgatgtgattcaaggaaaacacttcagcgtt
gtcgtagaaaacgaaaaccaagtagagctttccttcacaagaccatgggatccttcagtt
caaggaaaacagtcaccactaagtatagataggaggtttgtgatgctccgtgatcaccca
ggattctactcttatgccatatttgaacacgcagaggactttcctggtttcaacctcaat
actgccaggattgcattcatgctcagaaaagacaagtttcattacatggctgtggcagat
aataggcagagatatatgccccgaccagaagatcgactacccggaagaggtcagaacctg
tcatacccagaagcagttctccttgttgatcctgtggagcctgaatttaaaggagaagtc
gatgataagtaccaatacacattggaaaacaaagataataaggtgcatggttggatatgt
tttgacccacctgttggcttctggcaaattacacctagcaatgaattccgaaatggagga
cccttcaaacaagacctgacctcccatgtgaatcctaccactcttgcaatatttggcaca
tcacactatgcgggagtggatctgttactaaaatttaaagatggagaagtatggaagaaa
gtttttgggccagtatttatatatctcaattctgttccagaaggagaggaccccatttcc
ctttggaatgatgccaaggaacagatgaaaaaagaagtggaagcatggccctacgatttc
ccagcttcagaggattttcctaaatctcaccagaggggtgaagtaaggggtaaactgctt
gtatatgataggtacattaacgaggacaaagtaccagccagagcagcctatgttggtgtg
gcaccacaaggggatacgggatcatggcagagggaatccaagaggtatcagttttggacc
actactgatgagaagggttacttttccatacctaatataagagccggtgactataatctt
tacgcatgggtgcctaaatttattggagattacaagtatgaagtagcattaaacattacc
ccagggtctttcattgatgttggtgagcttacatttgagccactgagggatggtcctact
ttgtgggaaattggaatccctaatcgtactgcagccgaattctatgttcctgatcctaac
ccaatgtacatcaataaactatatgtaaatcatccagacaggtttagacaatatggacta
tgggagagatatgctgatctgtatccagataaagatttagtgtacacggtcggagtaagt
gactacacaaaagattggttctatgctcaggtcacaaggaaaatcggagacaatgaatac
acgggcacaacatggcaaatcaaattcagcattgactggttgattgaaggaggtatctac
aaactccggctggcacttgcatcagtccacaattctaatttgcaggttcgtgtcaatgat
gcttctgcaaatcctcccttgttttcgactggagaaatcgggggagataatgcaattgct
aggcatgggattcgtggaatctattggttgtttagtgtggacataccagctgttcaactc
atacctggggaaaacaccatatacttgacacagacgaagagtgagagcccgttccaaggc
attatgtacgactacattcgtctcgaaggtccgtatcacatagattcttag
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