Salvia splendens (scarlet sage): 121762543
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Entry
121762543 CDS
T07627
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121762543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121762543
03036 Chromosome and associated proteins [BR:
sspl03036
]
121762543
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121762543
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121762543
PBAF complex
121762543
GBAF(ncBAF) complex
121762543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Ig_TMM62
Motif
Other DBs
NCBI-GeneID:
121762543
NCBI-ProteinID:
XP_042014380
LinkDB
All DBs
Position
13:6503039..6506014
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AA seq
540 aa
AA seq
DB search
MAANSNNPQKNIGGSSPFGNSMPVNPSLQQQLASGFPGQFQFSEAQAQALAQAQAQSKAQ
AQAHAHAQMMAAHAQLQAQLQAAQGLSFNQGHPGVMANLGSQSPFLSGAGSMGLGAKRFP
QKPPVRPPSFVTSNVASPMRPMDASAAARRKKQKLPEKQLHERVAAILPESALYTQLLEF
ESRVDAALTRKKIDIQDALKTPTYLQKTLRIYVFNTFANQIRTIPKKPNAEPPTWTLKII
GRILEEGMDADQAAMMQKSNPSYPKFSAFFKRVTITLDQKIYPDNHLIIWDSTRAPAPHE
GFEVKRKGELEFTASIRLEMNYMPEKFKLSAALTELLGIEVDTRARIMAAVWHYVKARKL
QCPDDPSSFNCDPPLQRVFGEGKVKFTAVTQKITPHLFPPQPIHLEHRIKLSGNSPVGTA
CYDVLVDVPFPIQRELNALLANTEKTKEIDACDEAICAAIRKIHEHRRRRAFFLGFSQSP
VEFINALVYSQNKDLKLVSGEGSRNSEKERNSDFYNQPWVEDAVIRYLNRKLPGDASGNT
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaatagcaacaatcctcaaaagaacattgggggttcatccccttttgggaat
tctatgcctgtgaatccatcactacagcagcaactggcgtctggatttccgggccagttt
cagttttcagaagctcaggcgcaagcgcttgcccaggcccaggctcagtcgaaggcacaa
gcacaagctcatgcccatgcgcaaatgatggcagctcatgcacaactacaggctcagttg
caagctgctcaggggctttcgtttaaccagggtcatcctggagtaatggcaaacttgggt
tcgcaatctccttttctttcgggagctggaagcatgggattgggagccaaacgcttccca
caaaaaccacctgttcgtccaccaagctttgtgacgtctaatgtggcctctccaatgcgg
ccaatggatgcctcggctgctgctcgtaggaaaaagcagaagctcccagagaaacagtta
catgaaagagtcgcagctattttgcctgagtcagctctctacactcaactccttgagttt
gagtctcgagtggatgctgccttgacaaggaagaaaattgatatccaagatgccctaaag
actccaacttaccttcagaaaactctgcgtatttatgtcttcaacacttttgccaatcag
attcgcaccattcctaagaaaccaaatgccgagccacctacatggactcttaagattata
gggaggattttggaggagggaatggatgctgatcaggcagcaatgatgcagaaatctaac
ccctcgtatccaaagttctccgcatttttcaagagagttaccatcaccctcgaccagaaa
atataccctgataaccatttaattatatgggacagtactcgagcaccagctcctcacgaa
ggttttgaggtcaagaggaaaggagaactagaatttactgcaagcataagactagaaatg
aattatatgcctgagaagtttaaactttcagcagctttgacagagcttttaggtattgag
gttgatactcgtgccagaattatggctgcggtatggcattatgttaaggctcgaaaattg
cagtgcccagatgacccttcttctttcaactgtgatccaccacttcaaagagtatttggg
gaaggcaaagtcaagttcacggcagtcacacaaaaaattacgccccacctgtttcctcca
cagcccattcacctggaacataggataaaactttcaggtaatagtcctgtaggaactgca
tgttatgatgtattggttgatgtgcccttcccgatacagagagaattgaatgctttgttg
gccaacactgaaaagacaaaagagatagatgcctgtgacgaagcaatttgtgctgcaata
agaaagatccacgagcaccggaggagaagggcattctttcttggatttagtcaatcgcct
gtagagtttataaatgcacttgtatattctcaaaacaaggatctgaagcttgtttctgga
gaaggtagtcgtaattcagaaaaagagcggaattcagatttttacaaccagccatgggtt
gaagatgctgtcattcgctacctcaaccgaaagttgccaggagatgcctctggaaacaca
tag
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