Salvia splendens (scarlet sage): 121762572
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Entry
121762572 CDS
T07627
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121762572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121762572
Enzymes [BR:
sspl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
121762572
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
121762572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
121762572
NCBI-ProteinID:
XP_042014422
LinkDB
All DBs
Position
13:2403162..2418818
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AA seq
1184 aa
AA seq
DB search
MGASTGVNEEEKVVKSARRPHLAEEKDYEALREIFRHHIESFDHMLDNALYAMMQNVKPV
EVLDPATKLKLRIWLSDPEIFEPQKEFSRAMTDPLYPFECRQAKLSYSGTFMAYLNFQYG
DGGVIRDKISLGQFPIMLKSKKCHLRAAETPKELVSLKEEPSEMGGYFILNGHERVIRLV
VLPKRNYPTSMVRNSFRERREGYTDKAVVIRCVREDQSAVSVKLYYLNSGSARLGFWIQG
REYLLPVGIILKALTETTDHEIYVSLTSSYNEKYDRGKGSVGTQLIGERAKIILDELQHF
SLYTRTQCIQHIGEHFQAVMMRLEKQSYSDVADTVLRDYIFVHLDDNIDKFNLLILMLQK
LFSLVDQTSVPDNPDSLQHHEVLLPGHLITIYLKEKLQDWLLRAKRLLQDEVDKDNKIFE
LSSVTDARKVIDKSGPKQIGAAIENLLKTGRLNTQSGLDLQQRAGMTVMAERLNYLRFIS
HFRAVHRGAAFAGLRTTSVRKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRLTSYYDSK
GKLKDFLEIRKSISKVLVSIGMTPALPKLLLAGPPEVLPVLLDGRVVGSIASNIIEKAVS
HMRSLKVEASEIPEDLEVGYVPLSMGGAYPGLYLFTSASRFVRPVQNLQIPSEKSNNIEL
IGPFEQVYMEISCPDGGNGGRKDVFPATHAEIHPTGILSVVGNLTPWSDHNQSPRNMYQC
QMAKQTMGFSCQSLNARADQKLYHLQTPQTPIVRTQTYEKYNIDDCPLGTNAIVAVLAYS
GYDMEDAMVLNKSSVDRGMFRGYIYQTETVDLAEDKFRADRFQRSFGRSNVDKSSHQFID
SDGLPFVGQSIGPGDPYCSVYNEVTSSVSTNKLKGSDHAYVDYVAVDSKNKKHLQKANIR
FRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAML
LESIAAKGGALDGNFVDATPFSSSMKKSDGSESDSSLIDELGSQLVKRGFNHHGLEVLYS
GVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGKIDQVTRQPIKGRKRGGGVRFGEME
RDSLLAHGAAYLLHDRLHKSSDYHIADVCSLCGSILTTSLIQSDQKKVREMIGMRLPSKA
PKKVTCVSCKTSKGMETVAMPYVFRYLAAELAGMNIKMTLELSN
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgagcacgggagttaacgaagaagagaaggtcgtaaaatcggcaaggcggccg
cacctggcggaggagaaggactatgaagctctacgcgagattttccgccaccatattgaa
tcattcgaccatatgctagacaacgccctctatgccatgatgcagaacgtcaaacccgtc
gaagtcctcgatcctgcaaccaagctcaagcttagaatttggctctccgatccggaaata
tttgaacctcaaaaggagttttccagggctatgacagatccattatatccttttgagtgt
aggcaagcaaaactctcgtattctgggacattcatggcgtatttaaattttcagtacggt
gatggaggagtcataagagataaaattagtcttgggcagtttcctatcatgttaaagtcc
aaaaaatgtcatcttagggcggcagaaactcccaaggaattggtttcactcaaagaagag
ccgtcagaaatgggaggatactttatcctgaatggacatgagagagttattcgtcttgtg
gtactcccaaagagaaattatccaacgagcatggtgcggaattcttttcgtgaacggcgt
gaaggttatacagataaagcagtagtcataagatgtgttagagaagaccagtctgctgtg
tcagttaaactatactaccttaatagtgggagtgcaaggcttgggttctggatacaaggg
agggagtatttgcttcctgttggaatcatattaaaggctctgacagagacgactgatcat
gaaatctatgtgagtttaacatccagctacaatgaaaagtatgatcgaggaaagggatct
gttggcactcaactcattggtgaaagagcaaaaattattttggatgagcttcagcatttc
tctctctatactcgcactcagtgtatacaacatattggtgagcatttccaggctgttatg
atgagactggaaaaacaaagctactctgatgttgctgatactgtgttaagagattacata
tttgtccatctagatgacaatattgacaagttcaatctactcattttaatgctgcagaaa
ttgttttctctggtagaccagacatcagtaccggacaatcctgattctttacaacatcat
gaggttctactacctggccacctaataactatttatctcaaggaaaaattacaagattgg
ttactgagggcaaaacgattactacaagatgaagtcgacaaagacaacaaaatttttgaa
ttaagcagtgtgacagatgctaggaaagtcattgataaaagtggtccgaagcaaattggg
gcagctattgaaaatttgctgaagactggaaggttaaacacacaatcaggtctagattta
cagcagagagctgggatgacagttatggctgagagattaaactatctgcgtttcatttca
cactttcgagctgttcatcgaggtgctgcatttgctgggcttcgtacaacaagtgttcgg
aagttgttgcctgaatcttggggctttatgtgtcctgttcacacacccgatggtgagcca
tgtgggttactgaaccatatgacttcttcttgccggttaacttcatattatgattcaaaa
gggaaattgaaagacttcctagaaatccggaagtcaatatcaaaagttttggtaagcatt
ggaatgacaccagcattgccgaagcttctgctagctggccctcctgaagtacttcctgtt
cttctagatggtcgtgtagtgggttctattgcttctaatataatagaaaaggctgtctcc
catatgcggagcttaaaggtagaagcttcagagatacctgaagaccttgaggttggttat
gttcctttaagcatgggtggagcttaccctggcttatacctgttcacatctgcatctaga
tttgttcgtccagtgcagaatctccaaataccttctgaaaagagcaataatattgagctc
ataggtccctttgagcaggtttacatggaaataagttgtcctgatggaggaaatggtgga
aggaaggatgtttttcctgcaactcatgctgaaattcatccaactggaatattgagtgtt
gttggaaatcttacaccttggtctgaccacaatcagagtcctcgtaatatgtaccagtgc
cagatggcaaaacaaacaatgggtttttcttgtcaatctctaaacgctcgagctgatcaa
aagctgtatcatcttcagaccccacaaacaccaattgtgcggacacagacatatgaaaag
tacaatatcgatgattgtccacttggaactaatgcaattgtagcagttttagcatattcc
ggatatgacatggaggatgcaatggttttaaataagtcatctgtggatcgtggcatgttc
cgtggatacatataccagacagaaacagttgacttggctgaagataagttcagggcagat
cgcttccaaagatcatttgggagaagcaatgtggataaatcaagtcatcagtttattgac
tctgatggtctaccatttgttgggcagagcataggtcctggtgatccatattgtagcgtt
tataacgaagttacaagttcagtatcaactaataagttaaaaggttcagatcacgcatat
gtggactatgttgctgttgattcgaaaaacaaaaaacacttgcaaaaggcaaacattcgt
tttaggcatccgagaaatccagttattggtgataaatttagcagcagacacggtcaaaag
ggtgtttgctctcagctttggcaggatactgacatgcctttctctggagccaccggaatg
aggccagatcttatcatcaatcctcacgcatttccttctcggatgacaattgctatgctc
ttagaatcaattgctgctaagggaggcgccttggatggaaattttgtggatgctacacct
ttttcgagctcaatgaagaagtctgacgggtcagaatctgacagttcacttatagatgag
cttggttcgcaattggttaaacgtgggtttaatcaccacgggttggaggtattgtacagt
ggtgtttatgggacagagctgacatgcgaaatatttattgggcctgtatattatcagcgt
ctccgtcacatggtttccgataaatttcaggttcgttccacaggaaaaattgaccaggtg
acgagacaacctatcaaaggaaggaagcgcggtggtggtgtgcgttttggggaaatggaa
cgtgattcccttctagcacacggtgctgcatacctcttacacgataggctccacaagagt
tccgactatcacattgctgacgtgtgctccctctgcggaagcatcctgacgacatcacta
atccagtcggatcagaaaaaagtgcgcgaaatgattggtatgaggctgcctagcaaggct
ccgaaaaaggttacgtgtgtttcctgcaagactagtaagggcatggagaccgttgccatg
ccttacgtcttcagatatttagctgcggaattggcaggcatgaacatcaaaatgactctc
gaactaagtaactga
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