Salvia splendens (scarlet sage): 121762596
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Entry
121762596 CDS
T07627
Name
(RefSeq) cell division control protein 48 homolog E-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121762596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121762596
03009 Ribosome biogenesis [BR:
sspl03009
]
121762596
04131 Membrane trafficking [BR:
sspl04131
]
121762596
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121762596
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121762596
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
121762596
Membrane trafficking [BR:
sspl04131
]
SNARE
SNARE associated proteins
Others
121762596
Autophagy
Aggrephagy
Other aggrephagy associated proteins
121762596
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121762596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
AAA_28
nSTAND3
Mg_chelatase
AAA_18
Viral_helicase1
Parvo_NS1
ATPase_2
ABC_tran
IstB_IS21
AAA_lid_PRS2_C
AAA_7
NACHT
NB-ARC
AAA_24
TsaE
DUF815
Zeta_toxin
ResIII
Vps4_C
Phage_Mu_Gp48
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
121762596
NCBI-ProteinID:
XP_042014468
LinkDB
All DBs
Position
13:complement(24935475..24939761)
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AA seq
806 aa
AA seq
DB search
MSNKPESSDPNAKKDFSTAILERKKAANRLVVDEAINDDNSVVSLHPDTMEKLQIFRGDT
ILIKGKKRKDTVCIALAEDTCEQPKIRMNKVVRNNLRVRLGDVVSVHLCPDVKYGKRVHI
LPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVVETDPSEYCVV
APDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKMAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKARAHVIVMGATNRPNSIDPAL
RRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERISKNTHGYVGADLAALCTE
AALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSWE
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAA
DRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIF
KSCLRKSPISKDIDLRALAKYTQGFSGADITEICQRAVKYAIRENIEKDIEREKRRGENP
EAMEEDVEDEVAEIKPAHFEESMKFARRSVSDGDIRKYQAFAQTLQQSRGFGAEFRFEEQ
SRGVSAGAADPFAAGSVAADDDDLYS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaaaccagagtcctccgatcccaacgcgaagaaggattttagcactgcgatt
ttggagaggaaaaaggcggcgaatcggttggtggtggatgaggccatcaacgatgataat
tctgtagtttctcttcaccctgatactatggagaagctccagattttccgcggcgacaca
attttgatcaagggtaagaaacgaaaagatactgtctgcattgcccttgctgaggatacc
tgcgagcaaccaaagattcggatgaataaggttgtccggaacaatctcagagttagactt
ggagatgtcgtttccgtgcacttatgtcctgatgtgaagtatgggaagcgagtccacatt
ctccctgtggatgacaccattgaaggggttactggcaacctttttgatgcttacctgaaa
ccatatttcctagaggcatatcggcctgtgaggaaaggtgatttgtttcttgtgagggga
ggaatgagaagcgtagagttcaaggttgtcgaaactgatccttcggaatactgtgttgtt
gcccctgatacggaaatcttttgtgagggagagcctgtaaaaagggaggatgaagatagg
ttggatgaagttggttacgatgatgttggcggtgttcgtaaacagatggctcagattcgc
gaattggtagaactgccgctgaggcacccacagcttttcaagtcaattggagtgaagcct
ccgaaaggaattctgctttatggtcctcctggatctgggaaaaccttgattgcccgagct
gtggccaatgagactggtgctttcttcttctgtattaatggaccagaaataatgtcaaaa
atggcaggagaaagtgaaagcaatctcaggaaggcatttgaggaagctgagaagaatgcg
ccttccattatatttattgatgaaatcgactccattgcgcccaagagagagaaaacccat
ggagaagtagaaaggaggattgtgtcccaactcctgacattaatggatggactcaaggct
cgcgctcatgttattgtgatgggtgctacgaaccgtcccaacagcatagaccctgctctg
agaaggtttgggaggtttgatagggaaatagacataggtgttcctgatgaagtagggcgc
cttgaggttcttcgtatccacacaaagaacatgaaacttgctgaagatgttgatttggaa
agaatttccaagaatacacatggctacgttggtgctgatttagctgctttgtgcactgag
gctgcccttcaatgcattagggaaaagatggatgtgatcgacttggaagacgactccatt
gatgccgagatactgaactccatggctgtcagcaatgagcatttccagactgctcttgga
acaagcaacccctctgctctgcgtgaaacggttgttgaagtgcccaatgttagctgggaa
gacattggagggcttgagaatgtcaagcgggagctacaagagaccgttcaatatccggtt
gagcatcccgagaaatttgagaaatttggaatgtcaccctcgaaaggagttcttttctat
ggtcctcctggttgtggaaaaactttgctagccaaggctatcgcgaacgaatgccaggca
aacttcatcagtgtcaaggggcctgaactgctcactatgtggtttggagagagtgaggcc
aatgtaagagagattttcgacaaggctcgccagtctgctccttgcgtcttattttttgat
gaattggactcaattgctactcagagagggagcagtgtaggtgatgctggtggcgctgcc
gatcgtgtgttaaatcagctcctaacagaaatggacggaatgaatgctaagaagactgtc
ttcatcattggtgccaccaacaggcccgacatcattgatcctgccctcctccgccctggc
cgtcttgatcagctcatctacatccctcttcctgatgaggaatcgcgctaccaaatattc
aagtcgtgtttgagaaagtcgcctatctccaaagacatcgacctaagagcccttgctaag
tacactcaaggattcagtggcgctgatatcactgagatatgtcagcgtgcagtcaagtat
gccatcagagaaaacatcgaaaaggatatcgagagagagaaacggagaggcgagaacccc
gaggctatggaggaagatgtcgaggacgaggtggcagagatcaaacctgcacacttcgag
gaatcgatgaagtttgctcggaggagtgtgagtgacggcgacatacgcaagtaccaggcg
tttgctcagaccctccagcagtcgaggggattcggagcagaattccgatttgaggagcaa
agcaggggcgtctctgctggagctgccgacccttttgcagcaggctctgttgcagctgat
gacgatgatctctacagttaa
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