Salvia splendens (scarlet sage): 121762687
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Entry
121762687 CDS
T07627
Name
(RefSeq) recQ-mediated genome instability protein 1-like isoform X1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121762687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121762687
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
121762687
FA (Fanconi anemia) pathway
121762687
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
121762687
NCBI-ProteinID:
XP_042014580
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All DBs
Position
13:29581463..29585553
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AA seq
703 aa
AA seq
DB search
MNRRRLLVVSSDDEDDDDNPCPPLPTPPPPQQHWLDEDDLIAEDIESDFQTVTLNSANPT
PGSNNSFTAPPTATHTQGNHRFEPIPLDISDEDREDVSTGDNAFPEATNGNHGHFQVSES
PAVDGVLKRLGLSVRGEWLDSCLQGLQASTPGFQRMDDSSKAKLCFKQLFWSDMNFCGAG
VLPPNVHTLHLVDLKGPFVLQVDEAVNISNPVRGRYQNAAPGIKRCLKLSMTDGIQRVFG
MEYRPIKDLQVLGPAGLKVVVCNVHVRHGLLMLVPEVIEVLGGAVDELEAARQRLVEEIN
KPPRGRRNRPGEVVPLTTRATLAAWPPSNDAVPGHVDNNRPTNVIPQQTSRQGYAASVPA
NDMHRQDFATPINRNDAVANNTSHAPWPPEQDEIQGHTDPPITTHSRQGSSIIYNKEKYL
FPVAISQCLEDFPIFFHDTIGPGRRGQDIEVPVYRSNPQPSTVPALQRAQSVATAQHINE
PSSEVLTPLGGTRQGTPASYMPEEDVHAPVGMDDDEANTSSIHMDVDDISTVDNLEPHFI
LSGDKEPPFIYLASLSAKYAAIDDETSVVRGKIKCIITGVKGFQFKGRSTFELRVYIDDG
SLISEILIDHNVVRNAIGYSTQEVSKAYEFPEIKRIKEAAKEFQKFLANFEGTLLVEMRR
ESTVPVAVEMDQGCPTSDARLLLERVKSLTSTPIPLNTKSLSP
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaaggcgcctccttgtagtctcctccgacgacgaagacgacgatgataacccc
tgccctccgctgcctactcctcctccgcctcaacagcactggttagacgaagacgacctc
atcgccgaagacatcgagtccgatttccaaacagttacactgaactccgcaaatcctact
cccggcagcaacaattccttcaccgcaccccccaccgccactcacacacaaggaaaccac
cgattcgagccgattccacttgatatctccgacgaagaccgggaagatgtttctaccggt
gacaatgccttccctgaagccacgaacggtaatcacggtcattttcaagtgtcggagtcg
ccggcggtggatggggttttgaagaggctagggctcagtgttaggggagagtggctggat
tcgtgtttacaaggtttgcaggcatccacgccggggtttcagagaatggacgattcatcg
aaggctaagctttgctttaagcagttgttctggtcggacatgaatttctgcggcgcgggg
gtgcttccgccgaatgtgcacacattgcatttggttgatctcaaggggccttttgttctt
caggtggatgaggcagtaaacataagcaaccctgttcgcgggaggtaccaaaacgctgct
ccgggaatcaagagatgccttaaactgtctatgacagacggaatccaacgtgtgtttggc
atggaatatcgacccatcaaagatcttcaagttttggggccggcaggactgaaggtagtt
gtttgtaatgtacatgttaggcatgggctcttgatgctagtccctgaagttattgaggtg
ttgggaggagccgtagatgagttggaagctgcacgacagaggcttgttgaagaaataaat
aagccacctcggggaagaagaaataggccaggggaggttgttcctctgacaactagggca
acacttgctgcatggccacctagtaatgatgcagttccagggcatgtagataataaccgc
ccaacgaatgtaattccccagcaaacaagcaggcaaggttatgcagctagtgtacctgcc
aatgatatgcacagacaagactttgctactccaattaatagaaatgatgctgtggccaac
aacacttcacatgcaccctggccacctgaacaagatgaaattcaagggcatactgatcct
cctataactactcattcacgacaaggttcatctataatctataataaggaaaaatatctt
tttcctgtagctatctcccaatgcttggaagattttcctatttttttccatgataccata
ggccctggcagacgcggacaagacattgaagttcctgtgtatcgaagtaatcctcagcct
agtaccgtgcctgcactgcagcgtgcacaatctgttgccactgctcagcatattaatgaa
ccctcatcagaagttttgacacctttaggagggactaggcaaggcacccctgccagttat
atgcctgaggaggatgttcatgcacctgtcggcatggatgatgacgaggctaacacatct
tccatacacatggatgttgatgatatatctactgtggataatctggaaccgcattttata
ctttctggagataaagaaccccctttcatatatttggctagtttatcagcaaagtatgca
gctattgatgatgaaacatctgttgttcgaggaaaaataaagtgtataataactggtgtc
aagggatttcaattcaaaggaaggtctacctttgaacttcgtgtttatatcgacgatggc
agtcttatctctgagatcctcatcgaccacaacgttgtacggaatgcaattggttattct
actcaagaggtttcaaaggcctatgagtttccagaaatcaaacggatcaaggaggcagca
aaagaatttcaaaaatttctagctaattttgaggggacattgcttgtagagatgcgcaga
gagtctaccgtcccagttgccgtggagatggaccagggctgtcctacctctgatgctcgg
ttgcttcttgagagggtcaagtcgctgacttctacccctatccccctaaacactaaatcc
ttatccccataa
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