Salvia splendens (scarlet sage): 121762689
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Entry
121762689 CDS
T07627
Name
(RefSeq) SWI/SNF complex subunit SWI3A-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121762689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121762689
03036 Chromosome and associated proteins [BR:
sspl03036
]
121762689
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121762689
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121762689
PBAF complex
121762689
GBAF(ncBAF) complex
121762689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
121762689
NCBI-ProteinID:
XP_042014583
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All DBs
Position
13:29577702..29581331
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AA seq
569 aa
AA seq
DB search
MERIIPELELYTIPSYSSWFSWINIHEVEKFSLREFFDGSSITRTPRIYKEYRDFIITKY
REDPSRKLTFTEVRKSLVGDISVLHKVFTFLEKWGLINFNVSGSDVGGNSREGGSGTASF
GDEEEEREGDWKGRMKVEEGAPHGVRVVAAPNSMKPLVAPPQPPPSVGGDGGGVVGEVGE
SGFKWPPLASYSDVYGELMLQEERNKGGVVCGNCKENCDSKQYEYTKEASFILCEKCFES
GKYEKEKSADDFKLKDTVNQAVGWTEEETLLLLESILKHGDDWDLVSKNVQTKSKLECIS
KPMQLPFGDLMLGAGLRKGGLLDIIGDGKQAPVPSSESLESVKAEEPSSEVQNKDQQNGD
AKCEGPLRKRVCTGPTSDAGNYMMKQVTRISTMLDPHITASAADAAITSLCYENQCSREL
FDDNDGKFFDSIGSPEASNPERDADCDADNAEEDKNPNQSEIGGISFAKNIIPLNLKTRA
ATATALGVAAANAKMLADKEEKEIGNLVAIMIEKQLKKLQGKVKHFEDLELIMENENTQL
EEAEQSLIMERLDVLQRAFDAGIPRSKGA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaatcattccagagttggagctctacaccattcccagctactccagttggttc
tcttggattaacattcacgaagtcgagaagttttctctgcgagaattcttcgacggcagc
tcaatcaccagaacgcccagaatctacaaagagtacagggacttcatcatcaccaaatac
agagaggacccttccagaaagctcactttcaccgaggtccggaagtcgctagtgggcgac
atcagcgtcctccacaaagtttttacgtttttggagaaatggggtctcattaatttcaac
gtttctggtagtgatgtggggggaaatagtcgtgaggggggctctggaacggcgtcgttc
ggggatgaggaggaggagagggagggggattggaaggggcggatgaaggttgaagaaggt
gcccctcatggggtgagagtggtggcagcgcccaattccatgaaaccgctagtggcgcca
ccccaaccgcctccttctgtgggaggggatggtggcggggtcgttggggaggtgggagaa
agtgggtttaagtggccgccattggcctcttattcggatgtttacggggagttgatgttg
caggaggagaggaacaagggtggtgtggtgtgcgggaattgtaaagaaaattgtgattct
aaacagtatgaatatacgaaggaggcaagttttattctttgtgaaaaatgcttcgaaagt
ggaaaatatgagaaggaaaaatcggcagatgacttcaagttaaaagatactgttaatcag
gcagttggctggacagaggaggaaactctacttcttttagaatctatcttaaagcacgga
gatgactgggatcttgtttctaagaatgttcagacaaaaagtaaactggaatgcatctca
aagcctatgcagctgccatttggcgatcttatgttgggggctggccttagaaagggtgga
ttattggatataattggtgatggcaagcaagcaccggtaccttctagtgaatcactagaa
tctgtgaaggctgaggaaccaagctccgaggttcagaataaggatcagcagaacggagat
gccaagtgcgaaggtcctctaaggaaacgagtgtgcactggaccaacttctgatgctgga
aattatatgatgaaacaggtaactcgcatttctacgatgttggatccacatatcacagct
tcggcagctgatgctgctattacttctctttgctacgagaaccagtgttcaagagagcta
tttgacgacaatgatggcaaatttttcgactcaataggctcccctgaagccagtaatcct
gagagagacgctgattgcgatgctgataatgcagaagaagataaaaaccccaatcaatca
gaaattggggggatatcatttgcgaagaatataataccgctaaatttgaaaacgcgggct
gcaactgcaacagcacttggtgtagctgctgcaaatgcaaagatgttggctgataaggag
gagaaagagattggaaacttggttgctattatgattgagaaacagctcaagaaactgcag
ggcaaggtgaagcattttgaagatcttgagctaattatggaaaacgaaaacacccaactt
gaagaagccgagcaatctctcatcatggagagactggacgtgttgcaaagggcgttcgat
gctggtatacccagatcaaaaggagcataa
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