Salvia splendens (scarlet sage): 121762995
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Entry
121762995 CDS
T07627
Name
(RefSeq) structure-specific endonuclease subunit SLX1-like
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121762995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121762995
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121762995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
T5orf172
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
121762995
NCBI-ProteinID:
XP_042014965
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Position
2:23614731..23617667
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AA seq
181 aa
AA seq
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MATPLSRTFRSVKPHSNTVLPFAKTPISSEFPPIILPQVKSPEKPSSPATTSPPKNPWTV
YLILSTNPPIKTYVGVTNNFSRRLKQHNGELIGGAKASTAGRPWTCACLIQGFADKCKAY
QFEAKWKSISKKLPRKRSGKNQEQAENSQHLLLQHRYAALNQLRDFIYCSDLDINWHLDP
T
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccattgtcgagaacattcagatcagtgaaaccccattcaaatactgttctt
ccctttgccaaaacacccatttcatctgaattcccaccaattattttgccccaagtcaaa
tctccggagaaaccctcatcacccgctacaacatctccacctaagaatccttggactgtt
tatctaatcctctccaccaatccgcccatcaagacttatgtcggtgtcaccaataatttc
tctcgccgcttgaaacagcacaacggagagttaataggtggcgcaaaagcctcgactgct
ggaaggccgtggacttgtgcatgtcttatacagggatttgcggataaatgtaaagcttat
caatttgaagcaaagtggaaaagcatctcaaaaaaattgccgcggaaaagaagtggcaag
aatcaggagcaagcagagaattcgcagcacttgctattacaacatagatatgcagctcta
aatcaactcagggatttcatttattgcagtgatttggatatcaactggcacttggatccg
acataa
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