Salvia splendens (scarlet sage): 121763219
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Entry
121763219 CDS
T07627
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121763219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121763219
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121763219
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121763219
NCBI-ProteinID:
XP_042015107
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All DBs
Position
14:2238196..2240226
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AA seq
371 aa
AA seq
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MDDSEQNKLFVGGISWDTTDDALKAHFGQYGAVLGSVIARDRISGNPRGFAFVTFSDSSA
VDHALQDSHQILSRTVEVKRAIPRSEQQSQQQNYRGVSRNNSRTNSRSNVQFRTKKIFVG
GLSANLTEEEFRRYFEKFGRITDVVVMHDNLTHRPRGFGFITFDSEDSVEEVMQKSFHEL
TGKLVEVKRAVPKDGIGSSNIGYNGRLGDGRSPTSFNSYQQGNYVPLNTRYGYFPGYGNV
AGYPYGAGMYGGGYPSGGYGGVSYGLTPIAPRSPWNPAMVGVRGGFLPYGSAAPVYPSYV
NGGPGVMGLSMNGYGGILGGDAQHSTESTPSQTGINNVDANSFGSGRGFGGAASKQSHRV
SDKSYQGANSS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggacgattcggagcagaataagctgtttgtcgggggcatttcgtgggacacgacggac
gatgccctcaaggcccatttcggccagtacggcgccgttttgggctccgtgattgctcgg
gatcggatttctggtaaccccaggggcttcgccttcgtcaccttctcggattcttccgcc
gtcgaccacgctcttcaggattcccatcaaattcttagcagaacggtggaagtgaagagg
gccattcccaggagcgaacaacaaagtcaacaacagaactataggggagtgagtaggaat
aacagtaggactaacagtaggagcaacgtgcagtttaggacgaagaagattttcgtaggg
ggtttgtcggctaacttgactgaggaagaattcagaagatactttgagaagtttggtagg
attaccgatgtagttgtgatgcatgacaatctgactcataggccgaggggatttggtttt
attacctttgattcagaggattcggttgaggaagttatgcagaagagcttccatgagttg
actggaaagcttgtcgaggttaaaagagctgttccaaaggatggaattggcagtagtaac
attggttataatggaaggttaggcgatggaagaagccctactagcttcaattcttatcag
caggggaattacgtgcctctaaatactagatatgggtatttccctggatatggtaatgtg
gctgggtacccatatggagctgggatgtatggtggtggttatccctctggagggtatggt
ggagttagttacggactcactccaattgccccaaggagtccttggaatccagcgatggtt
ggtgtcaggggaggtttcttgccctatggaagtgctgctcctgtgtatccctcctacgtg
aatggcggacctggagttatgggactgtctatgaatggatatggtgggatattgggtgga
gatgcacaacactcgactgagtcaacaccctctcagactggtataaataatgtagatgcc
aattcttttggttctggtagaggttttggaggtgcagctagcaaacagagtcatagagtt
agtgataagtcttaccaaggtgctaactcaagctga
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