Salvia splendens (scarlet sage): 121763220
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Entry
121763220 CDS
T07627
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121763220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121763220
03110 Chaperones and folding catalysts [BR:
sspl03110
]
121763220
03029 Mitochondrial biogenesis [BR:
sspl03029
]
121763220
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121763220
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
121763220
Messenger RNA biogenesis [BR:
sspl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
121763220
Chaperones and folding catalysts [BR:
sspl03110
]
Heat shock proteins
HSP60 / Chaperonin
121763220
Mitochondrial biogenesis [BR:
sspl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
121763220
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121763220
Exosomal proteins of other body fluids (saliva and urine)
121763220
Exosomal proteins of breast cancer cells
121763220
Exosomal proteins of colorectal cancer cells
121763220
Exosomal proteins of bladder cancer cells
121763220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
121763220
NCBI-ProteinID:
XP_042015110
LinkDB
All DBs
Position
2:25104625..25108455
Genome browser
AA seq
579 aa
AA seq
DB search
MYRFAANLASKASVASKSSQQIGGRFGWSRNYAAKDIRFGVEARALMLKGVEDLADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIQDGKTLFNELEVVEGMKLDRGYISPYFITNQK
TQKCELEDPLILIYEKKISSINAIVKVLELALKRQRPLLIVAEDVESDALATLILNKLRA
GIKVCAIKAPGFGENRKSGLQDLAVLTGGQVITEELGMNLDDVELDILGSCKKVTISKDD
TVILDGSGEKKSIEERCEQIRSAVELSTSDYDKEKLQERLAKLSGGVAVLKIGGASETEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYAAKELEKLPTANFDQKIGVQIIQNALKT
PVFTIAANAGVEGAVVVGKLLESENPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAIVVEQPTEAKAGPAMGGGGMGGMGGMDY
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcagcaaatctagcctccaaagccagcgttgcgagtaaaagcagccaa
cagattgggggtagattcggttggagcagaaactatgctgccaaagatattagatttgga
gtggaggctagggctttgatgcttaagggtgttgaagaccttgctgatgctgttaaagtc
accatgggtcctaaggggcgcaatgtagtgattgagcagagttggggtgcacccaaagtg
acaaaggatggtgtcactgttgctaagagcattgaatttaaggacaaagttaagaatatt
ggtgctagccttgttaaacaggtggcaaatgctaccaatgatgttgctggtgatggtacg
acctgtgctactgtccttactcgtgcaatattcactgaaggctgcaagtcagtggcagct
ggcatgaacgctatggatctaagacgtggcattaccatggctgttgatgctgttgttaca
aacttgaaaagcagagcaaggatgattagcacatcggaggagattgctcaggttggaact
atttctgctaatggagagagggaaattggtgagctgattgcaaaggccatggaaaaagtt
ggaaaagagggtgtcataacaattcaagatgggaagacactgttcaatgagttggaagta
gttgagggtatgaagcttgacagaggctatatctccccatacttcatcacaaaccagaag
actcagaaatgtgaattggaggatcctcttattcttatttacgagaagaaaatctctagc
ataaatgctattgttaaagtccttgaattggctttgaagaggcaaaggccacttctgata
gtcgcggaggatgtggaaagcgatgcactggccactcttatccttaacaagcttcgagct
ggaatcaaggtctgtgctatcaaagcgcctgggttcggtgagaacaggaaatcgggcttg
caagatcttgctgttttaactgggggccaagtcataacagaagaacttggaatgaacttg
gatgatgtggaactggatatactgggatcgtgcaagaaggtcaccatatcaaaggatgat
actgttattcttgatggatctggtgagaagaaatccattgaagaaagatgcgagcagatc
aggtcagcagtcgaattgagcacttctgattatgacaaggagaagttgcaagaaaggctt
gccaagctatccggtggtgtagctgtgctaaagattggaggagccagcgaaacagaagtt
ggtgagaagaaagatagagtgactgacgctcttaacgccacaaaagcagctgtagaggaa
gggattgtgcccggtggaggtgttgctctcctctacgcagccaaagaattggagaagctg
ccaacagccaacttcgatcagaagattggtgtccaaattattcaaaatgcgttgaagacg
ccagttttcactattgcagcaaatgccggtgtggagggtgccgttgtggttggcaaattg
ttggaatcagaaaatccagacctcggatatgatgcagctaaaggtgaatacgtggatatg
gtgaaggctggaatcatcgacccgttgaaggtcattagaactgcgctcgttgatgctgct
agtgtctcttcattgatgacaacgacagaggcgattgtggtagaacaaccgacagaggcg
aaggctggaccagcgatgggcggtgggggcatgggaggaatgggtggcatggactactga
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