Salvia splendens (scarlet sage): 121763234
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Entry
121763234 CDS
T07627
Name
(RefSeq) protein DAMAGED DNA-BINDING 2-like
KO
K10140
DNA damage-binding protein 2
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03420
Nucleotide excision repair
sspl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121763234
09124 Replication and repair
03420 Nucleotide excision repair
121763234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121763234
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121763234
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121763234
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
121763234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
121763234
NCBI-ProteinID:
XP_042015123
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All DBs
Position
14:complement(21473418..21477679)
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AA seq
552 aa
AA seq
DB search
MAPQTRRVPSFPKIVIERDSDTEESSEEEEDFDDEVQKLAGEASDEEQAEEKDEASTSTK
RKREPITISLKRVCKVCKQSGHEAGFRGATYIDCPMKPCFLCKLPGHTTMTCPHKVATEF
GVFPAPLKNSHNSLKYLFDRQLKCHVPKMKPAFVIPNKVDCAVIRYHSRRVTCLEFHPTK
NNILISGDKKGQLGVWDYEKVHEKIVYGNIHSCILNNMKYNPLNDGTVYGASSDGTVSST
DLETGISSSLVDLNPAGWQGHSSWKMLYGLDLNSEKGILLAADNFGLLYMIDARSNNVTG
KPILIHKKKSKVTGLHCHPLQPDLLLSCGNDHFARIWDIRRLEDGSSIYNLQHNRVVNSA
YFSPQSGSKILTTSQDNRIRVWDSIFGDLDTPSREIVHSQDFNRHLTPFRAEWDPKDISE
SLVVVGRYISENYNGVALHPIDFIDITNGQLVAEVIDPNIMTITPVNKLHPRDDVLASGS
SRSIFIWKPQENTELERGEDVNRIIICGKAEKSRKGKLDDDSGDDDMFDSKKNSKTKKIQ
LKSKVHGGKRKC
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcagacgaggagggtcccctcgttccccaaaatcgtgattgagagagactcc
gacaccgaagaaagttcagaagaagaagaagattttgatgatgaagtccagaaactcgcc
ggagaggcgtcggacgaagagcaagcggaggaaaaggatgaggcgtcgacgtcgacgaag
aggaaaagagagcctatcactatcagcctcaagagagtttgcaaagtgtgtaagcagtca
ggtcatgaagcagggtttcgtggcgccacctacattgactgccctatgaagccatgtttt
ctttgcaaactgcctgggcataccacgatgacttgcccgcacaaagtggctactgagttt
ggggtttttcctgcacccttgaagaactctcataattcgttgaagtatcttttcgaccgc
caacttaagtgtcatgtgcctaagatgaagccagcatttgtgattccgaataaagttgac
tgtgcagtaattagatatcacagcagacgtgttacttgtttggagttccacccaacaaag
aacaacattcttatttctggggacaagaaaggacagcttggagtttgggattatgagaaa
gtgcacgagaagatagtatatggaaacatacatagctgcatattgaacaacatgaagtat
aatccattaaatgatggaaccgtctatggtgcctcttcagatggaactgtcagcagcact
gatttagaaactggaatttcatcatcattggtcgacctcaatcctgctgggtggcagggg
catagcagttggaagatgctctatggtctggatctgaactctgagaaaggaattttgctt
gctgcagataattttgggcttctttatatgattgatgcgcgctccaacaatgtgacagga
aagcctatactgattcacaagaaaaaaagcaaagttactggtttacactgccatcctcta
caaccagatctccttctaagttgtggcaacgatcacttcgctcgtatatgggacattcga
agacttgaagatggttcttctatttataatcttcaacacaaccgtgttgttaattcagcc
tatttttctccacaaagtggtagcaaaatactgaccacgtctcaggacaatcggattcgt
gtttgggattccatcttcggagatttggacactccaagccgagagattgtgcacagtcag
gatttcaatcggcatttgactccttttcgagctgaatgggatccaaaggatatatcagag
tccctcgttgttgttgggcgttacataagtgaaaactataatggagtagccttacatccc
atagattttattgacatcactaatggtcagttagtcgcggaggtgatagatccaaatata
atgacaatcactcctgtaaataagctacatccacgcgatgatgtcctggcatctggtagt
tccaggtctatcttcatatggaagccccaagaaaacactgagctagagcgtggagaggat
gttaatcggatcattatatgcgggaaggctgaaaaatcacggaaagggaagctcgatgat
gacagtggtgatgatgacatgtttgactccaagaagaactcgaagacgaagaaaattcag
ttaaaatctaaggtacatggtggtaagaggaaatgctga
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