Salvia splendens (scarlet sage): 121763335
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Entry
121763335 CDS
T07627
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121763335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121763335
03110 Chaperones and folding catalysts [BR:
sspl03110
]
121763335
03029 Mitochondrial biogenesis [BR:
sspl03029
]
121763335
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121763335
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
121763335
Messenger RNA biogenesis [BR:
sspl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
121763335
Chaperones and folding catalysts [BR:
sspl03110
]
Heat shock proteins
HSP60 / Chaperonin
121763335
Mitochondrial biogenesis [BR:
sspl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
121763335
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121763335
Exosomal proteins of other body fluids (saliva and urine)
121763335
Exosomal proteins of breast cancer cells
121763335
Exosomal proteins of colorectal cancer cells
121763335
Exosomal proteins of bladder cancer cells
121763335
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
121763335
NCBI-ProteinID:
XP_042015271
LinkDB
All DBs
Position
14:19664441..19668297
Genome browser
AA seq
604 aa
AA seq
DB search
MAGLSSVGSLAAPGSRVLDDRIAVSSSRLSSLASISASSLGRRKNVVLRKTRPSQITAAK
KDLYFNNDGSAIKRLQAGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAREVE
LEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIE
KTTKALVAELQAISKEVEDSELADVAAVSAGNNYEVGNMIAEALSKVGRKGVVTLEEGRS
AENNLYVVEGMQFDRGYISPYFVTDSEKMTVEYENCKLLLVDKKITNARDLINVLEDAIR
GSYPVLIIAEDIEQEALGTLVVNKLRGALKVAALKAPGFGERKSQYLDDIATLTGGTVIR
EEVGLTLDKADKEVLGHAAKVLLSKDSTTIVGDGSTQDAINKRVSQIKNLIEAADQDYEK
EKLNERIAKLSGGVAVVQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRL
ASKVDAIKETLDNVEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYN
AATGQYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPVVAGNPMDNS
GYGY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggctggcctttcctcagttggttcattggctgctcccggcagcagggttcttgatgat
agaatcgcagtttcatccagcaggttgtcgtctcttgcttccatatccgctagttcgctt
gggaggagaaagaatgtggtcctccgcaaaacacgcccttctcagataacagctgctaag
aaggacttgtacttcaataacgatggctcagccatcaagaggcttcaggctggtgttaac
aaacttgccgatctagttggtgtcacccttggacccaagggaaggaatgttgtgcttgaa
agcaagtatggtgcaccaaaaattgtcaatgatggagttacagtggctcgtgaggttgag
ttggaggatccagttgagaacataggagctaaattggtaagacaagccgctgccaagaca
aacgacctggccggggatgggacaacaacatccgttgttcttgcacaagggcttattgcc
gaaggtgtcaaggttgtcgcagccggagcaaaccctgtccttattacaagaggaattgaa
aagactaccaaggcattggttgctgaactgcaagcgatatctaaagaggttgaagatagt
gaactagcagatgttgctgctgtaagtgcaggaaacaactatgaagtggggaatatgatc
gctgaggctttgagcaaagttggtaggaaaggtgttgttactcttgaagagggacgaagc
gcagaaaacaatctttatgttgttgaaggaatgcagtttgaccgtggctacatctctccc
tactttgtaaccgacagcgagaaaatgactgttgagtatgagaattgcaagttgttgctt
gttgacaagaaaataacaaatgcaagggatctcattaatgtcttggaggatgccattaga
ggcagttatcccgtattgattattgctgaagatattgagcaagaagctctaggaactctt
gttgtgaacaagctcaggggggcacttaaagttgccgctcttaaagctccaggatttggg
gagagaaagagtcagtatcttgatgacattgctactttgaccggaggaactgtgatcagg
gaggaagtcgggttaaccttagacaaagctgacaaggaagttttgggtcatgctgccaag
gtgctgttgagcaaggattccactacaatagttggggatggtagcactcaagacgctata
aacaaacgtgtctctcaaattaaaaacctcattgaggctgctgatcaagattacgagaag
gagaagctaaatgagagaatcgcaaagctatcaggaggggttgctgtggttcaggttgga
gcgcaaactgaaacagagctgaaagagaagaagcttagagtagaagatgctctcaacgcc
actaaggctgccgttgaggaaggaatcgtcgttggaggtggatgcacgctattgaggctt
gcatccaaagtagatgcaatcaaggaaactcttgataatgtcgaggagaaggttggagca
gatattgtgaaaagagctttgagttatccactgaaattgatagccaagaatgctggtgtt
aatggaagtgttgttagtgaaaaggtgctgtcaagtgataacccaaaatacggatacaat
gctgcaaccggacagtatgaagatctcatggctgcaggaattattgacccgactaaggtg
gtgaggtgttgcttagagcacgcatcttcggtggcgaagacattcttgatgtcggactgc
gtggtggtggagatcaaggagcctgagccagtcgtggcaggaaacccaatggacaactca
gggtatggttactaa
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