KEGG   Salvia splendens (scarlet sage): 121763382
Entry
121763382         CDS       T07627                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03018  RNA degradation
sspl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121763382
  09123 Folding, sorting and degradation
   03018 RNA degradation
    121763382
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sspl03019]
    121763382
   03041 Spliceosome [BR:sspl03041]
    121763382
Messenger RNA biogenesis [BR:sspl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     121763382
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     121763382
Spliceosome [BR:sspl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    121763382
SSDB
Motif
Pfam: LSM KNOX2
Other DBs
NCBI-GeneID: 121763382
NCBI-ProteinID: XP_042015327
LinkDB
Position
14:complement(4264033..4267782)
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRLVTGTLKGYDQLLNLVLDEAVEFLRDPEDPLKT
TDQTRRIGLIVCRGTAVMLVSPTDGTDEISNPFIQPDGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtctggcagaaaagaaactgttctggacttggcgaaattcgtcgacaagggtgttcaa
gtcaaactaactggtggaaggctggtgactggaactttaaaaggctatgaccagttgctc
aatcttgttttggatgaagcagtagaatttctcagagatccagaagatccgctaaagaca
actgatcagacccgccgcattggcttaatagtttgccgaggaactgctgttatgctcgtt
tccccaacagatggaacagatgagatttccaatccattcattcagcctgatggggcatag

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