Salvia splendens (scarlet sage): 121763544
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Entry
121763544 CDS
T07627
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
121763544
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
121763544
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
121763544
NCBI-ProteinID:
XP_042015514
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Position
14:complement(17434205..17438676)
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AA seq
686 aa
AA seq
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MLCCVHKYWFCLSRHHGEEGCRRRSTPRCVLIILSFFFLLITRNHAHRSTPPVKLHVTDQ
HVEIDNSIVKITLSNPGGMITCLGYENITNVLEYRLEEGRMRRGYYDIMWRRPDRNESNL
DTLDCTSFRVVAATDDQVEVSFTKTWHHFLDGEVPLDIDKRYIVLRGSSGFYSYAILKHR
AGWPDLNIGEARIVFKLRQDMFHYMVISDDKQRVMPTSMDRKGCHNLDYREAVLLTNSSN
PLLRGEVDDKYQYSCENKDNHVHGWISSNPHIGFWVITPSDEFRAGGPIKQDLTSHATST
SLAIFFSAHYAGADFGVRLRNGERWKKVFGPVFMYLNSDSTNNPNAIWADAKRQAAQETK
KWPYDFPLSPDFPHSNQRGAIIGRLFVNDGAITLANLAYLGLAQPGEAGSWQENTKGYQF
WTRSDERGKFIIKGVRAGTYNLYAWVPGVIGDYKHHANITIRPGSQVVMGDIMYDPPRNG
PTLWEIGIPDRSAAEFYVPNPTPHLVNRLYVNHTEKYRQYGLWNRYTDLYPLHDLIYTVG
VSDYRRDWFFAHVNSLREISIAISRRVKGSYVATAWQVVFNARHVQMRGIYTLRVALASA
NFAEIQVWVNKHKGVGPHFSTGIIGGDNAIARHGIHGLYRLYSVKISGSQLLEGRNTIYF
RQARGYLPFLGAMYDYIRLEAPPRPS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgttatgctgcgtacataagtattggttttgtttgtcgcgacaccatggagaagaaggg
tgtcgacgaagatcaactccgcgctgcgttcttattatactgtctttctttttccttcta
attaccaggaatcatgcacacaggtcaacgcctccagtcaaactccacgtaactgaccaa
catgtggagatagataacagcattgttaaaatcacgctgtcgaatccgggtggcatgatc
acatgcctcgggtacgaaaacatcaccaatgtacttgaatatcgccttgaagaagggcga
atgcgaagaggttactatgacatcatgtggaggaggccagatcgcaacgaaagtaacttg
gatacgctcgactgtacgagcttcagagttgtagcagcaaccgatgatcaagttgaagtt
tcttttacaaagacatggcatcacttccttgatggcgaagtacctctcgacattgataag
aggtatattgtcttgcgtggatcttctggtttctactcgtatgcaattttaaagcatagg
gcaggatggcccgatctaaacataggcgaagcaagaatcgtattcaagcttagacaagat
atgtttcattacatggtaatatctgacgataagcaacgagtcatgcctacatcaatggat
aggaaaggatgccacaatcttgattacagggaggctgttctgctaacaaattccagcaat
cctctacttagaggagaggtggatgataagtatcagtactcgtgcgagaacaaggataat
catgttcacggatggattagttcgaatcctcacattgggttttgggtgataacgcctagt
gatgagttccgagctggtggccctatcaaacaagatcttacttcacatgctacctctact
tccctagccatattctttagcgcgcattacgctggtgcagattttggagttagattgcgc
aatggagagcggtggaagaaggtcttcggccctgttttcatgtacctcaactctgactct
accaataacccgaatgcaatttgggcagacgctaagagacaggctgcacaggagaccaag
aaatggccttacgatttcccattgtcaccagattttcctcattcgaaccaacgtggtgcc
atcattggccgactatttgtaaacgacggtgcaatcacactagcaaatttggcatatctg
ggattggctcaacccggagaagctggatcttggcaagagaacactaagggctatcaattt
tggacccgaagtgacgagaggggcaagttcatcatcaaaggtgttagagcaggcacttac
aatttgtacgcttgggtgccaggtgtcatcggggactacaaacaccatgctaacattacg
attcgaccaggcagccaagtagtaatgggggatattatgtacgatcctccaaggaatggt
ccgactctgtgggaaatcggaatccctgatcgatcagcagctgagttctacgttcctaat
ccaacccctcacctagtaaacaggctatacgttaaccacaccgaaaagtacaggcaatat
ggtttgtggaacagatacactgacttatatcctcttcatgatctaatttacaccgttgga
gtcagcgactatcgtagagactggttttttgcccatgtaaacagtttacgagagattagc
attgcaatttccaggcgtgtgaagggaagctatgtagcaacggcatggcaggtcgtgttc
aatgcgagacacgtgcaaatgagaggaatttacacgcttcgggtagcattggcatctgcc
aacttcgcagaaatccaagtatgggtcaacaagcacaagggcgttggaccacatttctca
acgggaataattggcggagacaacgcgattgctaggcatggcattcatggcctctacaga
ttatacagtgtcaaaatttcaggatctcaattgttggaaggaagaaacacaatttatttt
aggcaagcacgaggatacttgccattccttggcgctatgtatgactacattcgcctcgaa
gccccaccccgtccctcataa
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