Salvia splendens (scarlet sage): 121763597
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Entry
121763597 CDS
T07627
Name
(RefSeq) polyadenylate-binding protein 2-like isoform X1
KO
K14396
polyadenylate-binding protein 2
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121763597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121763597
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121763597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
RBD_DEAH11
RRM_occluded
RBD_RDR6
HDV_ag
NTP_transferase
Metal_resist
Motif
Other DBs
NCBI-GeneID:
121763597
NCBI-ProteinID:
XP_042015588
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Position
2:11959914..11962472
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AA seq
198 aa
AA seq
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MEGDVEMAAVEEGAVVELDDMKKRLKEMEDEAAALREMQAKVEQEIGAVQADPAAAAANQ
TNREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTNKYGQPKGYAYVEFLETE
AVEQALLLNESELHGRQLKVSAKRTNVPGMKQFRPRRSNPQMGYRSRTPFMAAPYIFSPY
GYGKIPRFRVPMRYSPYF
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgatgtcgagatggcggcggtggaagagggagctgtcgttgagctggatgat
atgaagaagaggctgaaggagatggaggatgaggctgccgctcttcgggaaatgcaggcg
aaagttgaacaagaaattggcgccgttcaagcagatcctgctgcagctgcagccaatcag
acaaatagggaagaagtggatgctcgatcagtctttgttggcaatgtggattattcatgt
accccagaggaagtgcagcagcatttccagtcttgtgggactgtcaatagagtaactatc
aggactaacaagtatgggcaaccaaaggggtatgcctatgttgagttccttgaaaccgaa
gctgttgagcaggctcttcttctgaatgaatctgagctccatggtcgccagttgaaggta
tcagccaagaggaccaacgttccgggcatgaagcagttccgccctcggcgttccaatcct
caaatgggttatcgatctaggacacctttcatggctgctccatacatattttctccttac
ggatatgggaaaatccccaggtttagagtaccaatgagatacagcccttacttctga
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