Salvia splendens (scarlet sage): 121764288
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Entry
121764288 CDS
T07627
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03030
DNA replication
sspl03410
Base excision repair
sspl03420
Nucleotide excision repair
sspl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121764288
03410 Base excision repair
121764288
03420 Nucleotide excision repair
121764288
03430 Mismatch repair
121764288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121764288
03036 Chromosome and associated proteins [BR:
sspl03036
]
121764288
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121764288
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121764288
DNA Replication Termination Factors
ELG1-RFC complex
121764288
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121764288
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121764288
Check point factors
HRAD17(Rad24)-RFC complex
121764288
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
AAA_16
TIP49
AAA_5
RuvB_N
DUF7390
Rad17
GvpD_P-loop
Motif
Other DBs
NCBI-GeneID:
121764288
NCBI-ProteinID:
XP_042016266
LinkDB
All DBs
Position
14:complement(18711346..18714157)
Genome browser
AA seq
648 aa
AA seq
DB search
MEVSMRPNRIRSGYEPSDTENEHEHEHNHNGSSAYDHICSRSPLPASTPSPARRRHSKSP
YRPRTNADLPRRTYSDLRMPVSQRRHANANDCPFSQSECRTNNLNHNGSQFSASERRRYA
SPLKDDASLGRKERSSSYTRRAASAPRSRLRPRTKEVNMDEQKLPSVGEINEMVANANMR
SNGVGVNLDSMDSIFFSRAANQPSSALPKPPGRSSASSINQNSNWSSLMSRQSSNISDTS
GRTSGSTARFVASRRKNQSETTWFLCIKKGSCKTSNKSPVKERQFDEASFISKAVVVESL
RPLWADKHQPLSLAGFACHKNEAQLLLQLANGEMFPHILLKGPPGTGKKALTLALLRELY
GDPVWNESRPIQVVVPVSSSPHHVELNVYTESKAAYALTALVKQISSEYAIVPEISVALN
KAHYKVLVLYDVDKAAENIQHLIKWIMDCYADCCKLILCCEDDTDVLDSVKSRCKLIKIE
PSTTHQVMEVLIQIAKKEGFELSTSFASKIADKSKQNLRRAIMALEACKLHNYPFADDQH
IPVAWEEAVAELAADILADPSPKRLLTVRGKIQKILADFVHPKLILLKLVEQLLRGVDAS
LKREIYYWYAYYDKRLPSGASALLKLEEFVAKFMSIYRKSSNNRRQLI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggaggtctcaatgcgccccaaccgaatcagaagcggctacgagccatccgacacagag
aacgagcacgaacacgaacacaaccacaatggcagcagcgcgtacgaccatatatgcagc
agaagccctctgcctgcctccaccccgagccctgcccggagaaggcacagcaagtcccct
taccgaccgcgcaccaacgctgatctcccgcgcagaacctactctgatctccgcatgccc
gtctcccaacgaaggcacgccaacgcaaacgactgccccttctcccagtccgagtgcagg
actaataatctcaaccacaacgggagccaattctcagcatcagagcggaggagatacgct
tcccctttaaaggacgacgcgagtttagggcgtaaggagcggtctagtagctacaccaga
agggcagcatccgccccccggtcgaggctaagaccgcgaaccaaagaggtgaacatggat
gagcagaagctgccctctgttggagagatcaacgaaatggtcgccaatgctaacatgagg
tctaatggagtaggagttaacttagacagcatggactccatcttcttttcccgcgcagcg
aatcagccctcgtccgctctgcctaagccgcccgggagaagctctgcctcttccattaat
cagaattctaactggagctctctcatgagcaggcagagtagtaacataagcgacacgagc
gggcggacgagtggcagcaccgccagattcgtcgccagcagaaggaagaatcagtcggaa
acgacatggttcttgtgcatcaagaagggctcttgcaagacctctaacaagtccccggtg
aaggagaggcagttcgacgaggcttcttttattagcaaggcagtcgtggtcgagagcctc
aggccgctctgggctgataagcatcagcctctttccttggccggattcgcttgccacaag
aatgaagctcagcttcttctccagctcgcgaacggtgaaatgtttccgcatattttgctc
aaagggccgcccggtactggtaagaaggctctcacgttggctcttctccgcgagctatat
ggtgatcctgtttggaatgaatcaaggccgatccaagtagtcgtccctgtaagttcgagt
cctcaccacgtggaactcaacgtctacacagagtccaaagccgcatatgcactgacagct
ctagtgaagcaaatcagcagcgagtacgccatcgtccctgaaatcagtgtagctctgaac
aaggcacattacaaagtattggttctgtatgatgttgacaaggctgcagagaacatacaa
catctcataaaatggatcatggactgttacgcggattgttgcaagcttatcctttgctgc
gaggacgacacagacgtcctcgactctgtcaagagccgctgcaaactcatcaagatcgaa
ccctcaacaactcatcaagtaatggaggtcctcatccagatcgcgaagaaggaaggtttt
gaactatccacaagttttgcttcaaagattgcagacaaatcaaagcaaaacttgaggaga
gcaatcatggcacttgaagcatgcaaattgcacaactatccttttgcagatgatcaacat
atacccgttgcgtgggaggaggccgttgcggaacttgctgccgacattttggcagatcct
tctccaaagagattattgactgtgagaggaaagattcaaaaaattctggcagattttgtc
catccaaaactaatactcctgaaactagtcgaacaactccttcgaggagtcgatgccagt
ttgaaaagggaaatatactattggtatgcatactatgataagagactccctagtggagca
agtgctttactcaagttagaagaatttgtggcaaagtttatgagcatatataggaagagt
tccaacaatcggcgtcagttaatctga
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integrated database retrieval system
