Salvia splendens (scarlet sage): 121764543
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Entry
121764543 CDS
T07627
Name
(RefSeq) protein CHROMATIN REMODELING 20-like
KO
K10779
transcriptional regulator ATRX
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspl03000
]
121764543
03036 Chromosome and associated proteins [BR:
sspl03036
]
121764543
Transcription factors [BR:
sspl03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121764543
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121764543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
121764543
NCBI-ProteinID:
XP_042016486
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All DBs
Position
14:30898982..30904861
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AA seq
1213 aa
AA seq
DB search
SSSQERLSEEELENLVAELVEIEKRSAEAQEALEEEPLVEVEADVREELARSLSGDQLEK
AICEEMSLYKEEWELKLDELEKESAYLLEQLDGAGIDLSSLYKWIEKEVPNSCRTEAWRG
RTHWFGTEISEEATRSVKKAEEYLMIHRPVRRWQGASGFLGKKIGNCDGSASGDESLNKD
WEAFNILCSETASSKHWAAVYHASTPMQAAELGLKSAGVDEVEEIGDVDGASRDPFVVEA
IANERDLSLTLNQIRNFKKIKEEDDVKDDLKLCRKETMRKKRSRKGELTSIDEESRMDAF
MIHDDGSTKDAVEYLHDSSDERNGVVVCFSSESGSGNKANVNGRRDMRKSDVVVISSSDS
DSYADANDNSSVKTRKKIRRILDDGELGEETQKKIAIEKERQERLRSLEVTEFVTVGEGV
GAGHEAQDNASSGHIINLVREEGEEAVRIPPSISTKLKPHQISGIRFLWENIIQSVGKVR
SGDKGLGCILAHMMGLGKTFQVVAFLYTAMRCTDLGLKTALIVTPVSVLHNWHHEFSKWI
PSELRPLRIFMLKDAPREKRLELLMKWRTEGGVFLIGYSAFRNLSSGKYAKDPNMGREIS
HALQVGPDILVCDEAHTIKNTKAETTKALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR
EGFLGSCTEFRNRFQNPIENGQHSDATSEDVKIMNQRSYILYEQLKGFVHRMGDSIVKND
LCPKTVFVIEVKLSTLQRKLYRGFLNFHGFTKGKESGVKKSFFAGYQALAQILNHPGILQ
LRKENKDHSKFDGVEGSGDENIECNMVSKEKVDNPHKKRSNDYDDEEWWSGLLPEKTLNE
VDCSGKMVFLFDILTMCSDMGDKALVFSQSLSTLDLIEQYLSRLPQPGESGRCWTKGEDW
YRLDGKMESSERQKLVDRFNEARNERVKCVLISTRAGSLGINLYAANRVIIIDGSWNPTY
DLQAIYRAWRYGQTKPVFAYRLIAQATLEEKIYKRQVNKEGLAARVVDKQQVHRAISRGE
MVDFFDFADDESAVVSCDLGHEGDVDNPDTAGRVRDMLKQRRPPSLGASSDKVMQSLLSK
HQPRWILSHHEHEALLQENEDEKLSKEEQDSAWEVYRKTLELGAVPRVSPNDRSTDQHKV
SIDQFVLQSSAVVSAVESKPVDSSSDTARDTSCDGKCTKVMHQLTLRSQGTKIGCSTICE
ECGQEVSWELLGV
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
tcatcatctcaggagcgcctgtctgaagaggagttggaaaatctcgtagccgagcttgtg
gaaatcgagaaaagatctgccgaggcgcaagaggcgctggaagaggagcctctggtcgaa
gtagaagcggatgttagggaagaattagcccggtccctctctggtgatcaattggagaag
gctatttgtgaggagatgtcattgtacaaagaagagtgggaattgaagctcgatgagctc
gagaaagagagtgcttatctactggagcagcttgatggtgctggaatcgatctttccagt
ttgtacaagtggatcgagaaggaagttcctaacagctgccgcactgaagcatggagaggg
aggactcactggtttgggactgagatatcagaggaagctacaagatcagtcaaaaaggcg
gaggagtatctcatgatccacaggcctgtgagaagatggcaaggcgcaagtggcttcctc
gggaagaaaattggaaactgtgatggtagtgcaagtggagacgaaagcttgaataaagat
tgggaagcttttaacatattgtgctcagaaacggcgtctagcaagcactgggctgctgtc
taccatgccagcaccccgatgcaggctgctgaactcggcctaaaatctgctggagttgat
gaggtggaggagattggtgatgtcgatggtgcttcaagagatccattcgttgtagaagct
atagcaaacgaaagggatctcagtcttactcttaaccaaatcagaaattttaaaaagatt
aaagaggaggatgatgttaaggatgatctcaagctctgtaggaaagaaacgatgcgtaaa
aagcgaagcagaaagggagagcttacctcgatagacgaggagagccgtatggatgccttc
atgattcatgacgatggctctactaaggatgcggttgaatacctgcatgattcgtctgat
gagaggaatggagtagttgtatgctttagttctgaatctggttcaggcaacaaagccaat
gtcaacgggaggcgggatatgagaaaatctgatgttgttgttatctcaagttctgattct
gattcatatgcggatgccaacgacaactccagtgttaagacaaggaaaaagattcggaga
atcctcgatgatggcgagctgggggaggagacacagaagaaaatcgcaattgaaaaggaa
cgtcaagagcgccttcgatctttggaggttaccgaattcgtgacagttggagaaggcgtt
ggagctggacatgaagcccaggacaatgcctcctcgggccacataataaacttggtgagg
gaggaaggcgaagaggctgtgaggattcctccgagcatctcaaccaaactaaaaccccat
cagatttcagggatccgattcttgtgggaaaatatcattcagtcagtggggaaagtcaga
tccggagacaaaggtcttggttgcattcttgcacatatgatggggttaggaaagacgttt
caggtcgttgcgtttctctacacggctatgagatgcacggaccttgggctgaaaacagca
ctcatcgtgactccagtaagcgtgctacataactggcatcacgagttctcaaagtggata
ccatcggagctgagacctcttcgtattttcatgcttaaagatgctccacgggagaagagg
ctcgagttgctaatgaagtggagaaccgagggtggggtcttcttgatcggctactctgct
ttccgtaatttatcatccgggaagtatgccaaggatccgaacatggggagggaaatcagc
cacgcacttcaggttggaccggacatcctcgtgtgtgacgaggctcacacgatcaagaac
accaaggccgaaacgaccaaggccctcaagcaagtcaaatgccagagacggattgcactg
accggatcacctcttcagaacaatttgatggagtactattgcatggttgattttgttaga
gaaggctttcttggctcctgcaccgagtttaggaaccgcttccaaaatcccattgagaac
ggccagcacagcgatgctacatcggaggatgtcaagataatgaaccaaagatcgtacatt
ctgtacgaacagttgaagggattcgtgcatcggatgggagacagcattgtcaaaaacgac
ttatgccccaaaaccgtttttgtcatcgaggtaaagttatctactctccagaggaagctg
tatcgaggcttcctcaactttcatggcttcacgaagggcaaggagtctggcgtcaagaaa
tctttcttcgcgggctaccaagccttagctcagatattgaaccatcccggcattctgcaa
ctgaggaaagaaaacaaagaccatagcaaatttgacggtgtagagggctcgggtgatgag
aatatcgaatgcaacatggtatcgaaagagaaggtagataatcctcacaagaaacgtagc
aacgattatgatgatgaagagtggtggagtggtcttttgccagaaaagactctcaatgag
gtcgattgcagtggcaagatggtgtttctatttgatatcctcacaatgtgctcggatatg
ggcgataaggcgctcgtctttagccaaagtttgtcgactttggacctaatcgaacaatat
ctttcgagattgcctcaacctggagagagcggaagatgttggacgaagggggaggactgg
tacagattagacggaaaaatggaaagctcggagaggcagaagttggtggataggttcaac
gaagcacgtaacgaaagggtgaaatgtgtattgatttctacgagggccggatctctgggg
atcaatctttatgcagctaatcgagtcatcataatcgatggctcgtggaacccgacgtat
gatcttcaagctatataccgggcttggaggtatggtcagacgaagccggtcttcgcctac
cgtttgatcgctcaagcgacattggaggagaagatctacaaacgtcaggtgaacaaggaa
ggccttgcagcgcgggttgtcgacaagcagcaagtccacagggccatttctaggggagaa
atggtggatttttttgattttgcagacgatgagagtgctgttgtatcgtgcgatttgggg
cacgagggggacgtggataatccggatactgcgggtcgcgtgagggatatgttgaagcag
cgccggccgccttctcttggagcttcttcggacaaagtaatgcagagtttgctcagcaaa
catcagcccagatggattttgagtcatcacgagcacgaggcgctcttgcaagagaacgaa
gatgagaagctctcgaaagaggagcaagattcggcgtgggaagtgtacaggaagacgctc
gaattgggggcagtcccgcgcgtttctccaaacgatcgttcaactgatcagcataaggtc
tccatcgatcaattcgtactgcagagttcagcggttgtgtctgcagttgagtcgaagcca
gtggattcctcatccgatacagcacgggacacgagctgcgacgggaagtgcacgaaggtg
atgcatcaactaacattaaggagtcaaggcacgaagataggttgtagcaccatttgtgaa
gaatgtgggcaagaagtaagttgggaacttttgggtgtataa
DBGET
integrated database retrieval system
