Salvia splendens (scarlet sage): 121765140
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Entry
121765140 CDS
T07627
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121765140
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sspl01009
]
121765140
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121765140
03036 Chromosome and associated proteins [BR:
sspl03036
]
121765140
Protein phosphatases and associated proteins [BR:
sspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121765140
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121765140
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121765140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_1
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
121765140
NCBI-ProteinID:
XP_042017105
LinkDB
All DBs
Position
14:complement(29746108..29752627)
Genome browser
AA seq
538 aa
AA seq
DB search
MDLDFNGDVTSLDAELLQLQEVSPLAIKANPYVAEKLFDQWLSLPETNSLVKSLLNNAKG
GGPLNAAGAGSTNTAASNTAPSMFPAGSTPPLSPRSSSGSPRIMKHRAGPSNLPSPLKLV
NEPMKELIPQFYFQNGRPPPNELKERCLFRINQFFYGHVDGLQMHEFKPVTKEICKLPSF
FSAVLFRKIDTEGTGIVTRDAFVDYWINKNMLSKDLATQLYTILKQPEHRYLVQDDFKPV
LRELLTAHPGLEFLQSTPEFQERYAETVIYRIFYYVNRAGNSRLTLKELRRSNLIAAMQH
ADDEEDINKVLRYFSYEHFYVIYCKFWELDSDHDFLIDKENLIRYGNHALTYRIVDRIFS
QVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGIITRNEMQFFYE
EQLHRMECMAQEPVLFEDILCQIVDMVHPEEESYFTLRDIKGSRLSGSVFNILFNLNKFM
AFETRDPFLIRQERENPNLTEWDRFAHREYIRLSMEEDAEDASNGSGDVWDEPLEAPF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggatttggatttcaatggcgatgtcacgagcctcgatgctgaactgctgcagcttcag
gaggtgtctccgttggctattaaagccaacccgtatgttgccgagaagctgtttgatcag
tggctttcgcttccggaaaccaattccttggtaaaatcgctgctcaataatgccaaggga
ggtggccccttaaatgctgctggagcaggtagcacaaatactgcagctagcaatacggcg
ccttcaatgtttcctgcaggtagtacgccgccactttcaccaaggagttcttcaggttct
ccccgaatcatgaaacacagggcaggcccttctaatttaccctctcccttgaaattagtg
aatgaacccatgaaagagcttatacctcagttctatttccaaaatgggcgcccaccacct
aatgaactgaaagagcgatgcttgtttagaattaaccaatttttttatggtcacgtggat
ggactgcagatgcatgaatttaaaccagtaacgaaggaaatttgcaagctcccgtctttc
ttttctgctgtactgtttagaaagatcgacactgagggaactggaattgtgaccagggat
gcgtttgtcgattattggattaataaaaacatgttgtctaaggatctagcaacacagtta
tacacaatcttgaagcagccagagcacagatacttggtccaggatgactttaaacctgtt
ctacgagaacttttgaccgctcatcctgggttggaattcctacagagtacacctgaattt
caagaaagatatgctgaaactgtaatatacagaatattttactatgtgaatagagcgggt
aatagtcgtcttacactgaaggagctgagacgctcaaacttgattgctgcaatgcagcat
gcagatgacgaagaggatattaacaaagtcttgaggtacttctcctatgagcatttctat
gtcatatactgcaagttctgggagctggattcagatcatgattttttgattgacaaagaa
aacctcatcagatatggtaaccatgcacttacctacaggattgttgatagaatattttct
caggttccgagaaagttcaccagtaaggttgaaggaaagatgggatatgaagatttcgtc
tacttcatattgtcagaggaggataaatcatcagaacctagtcttgagtattggttcaag
tgcatagatttggatggtaatggcattataacgaggaatgaaatgcaattcttttatgag
gagcagttgcatagaatggaatgcatggcccaagagcctgtactttttgaagatatacta
tgtcaaattgttgacatggttcatccagaggaagagagctattttacgttgcgggatata
aaaggcagcagactttctggcagtgttttcaatatcctgtttaaccttaataagttcatg
gctttcgagactcgtgatccatttctaattcgccaggagcgtgagaaccctaatttgacg
gagtgggatcgctttgctcaccgagaatacattaggctctcgatggaggaagatgcagaa
gatgcctctaatggaagtggagatgtttgggatgaaccgctcgaggctcctttttga
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