Salvia splendens (scarlet sage): 121765257
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Entry
121765257 CDS
T07627
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03030
DNA replication
sspl03410
Base excision repair
sspl03420
Nucleotide excision repair
sspl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121765257
03410 Base excision repair
121765257
03420 Nucleotide excision repair
121765257
03430 Mismatch repair
121765257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121765257
03036 Chromosome and associated proteins [BR:
sspl03036
]
121765257
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121765257
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121765257
DNA Replication Termination Factors
ELG1-RFC complex
121765257
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121765257
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121765257
Check point factors
HRAD17(Rad24)-RFC complex
121765257
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_RFC1
RCF1-5-like_lid
RuvB_N
RFC_C
Motif
Other DBs
NCBI-GeneID:
121765257
NCBI-ProteinID:
XP_042017271
LinkDB
All DBs
Position
14:3887331..3892092
Genome browser
AA seq
575 aa
AA seq
DB search
MEKHSESSPGRESQSASSISSGSKSRFAVKVREWSSSWFSQKKLKRGNSSSSFSSNKTSQ
DGCASKTTESVAAAAKVKAKKKKKESERENASLLGMINEDTTMASQKPLRERDFEPLPML
PLSPLNEPLLESLPHTLPQITQPKVLSFPSPPPTPLSESQSAPTSPMVLQSPAPAHQTPS
TRGVRYDNQETNTNEYEIEYIWAEKYRPLHLQDFLCNRKAALELQAVVRNLHEKGEDFGH
FICEGNPGVGKRTMICALLREAFGPDKVQAKEERKEFHFKGEAVESIHVNLMVSPQHTEV
NLSELKGYAKHVILELINEKNQNSDKVLHSNLENSRAIILYEVDKLSTDSLSYMKWMLEK
FKGCNKVFFCCSDASKLESIKPLCRFIQLLEPTNEEILKVLASIAHQEGIKLPQQLADKI
TQNSRNNLRQAIRSFEATWNFNCCKASLKGAQLIRTGWEDTLAKIARNAVKEQSPKQLYN
IRQELQILLEHNVAPGFLLQALKDELKIILPQHLLPQFDKLYDSKKNHVTRKYLASTHQL
VESGKQPCDPRKNVHEFMNIEEFIARFMSWYKAWV
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacactccgagtctagtcctggaagagagagtcaatcagcaagttccatcagc
tctggctccaagtctcgttttgctgtcaaagtgcgtgaatggagctcgtcttggtttagc
cagaaaaaactcaaacgaggcaattcctcatcgagtttttcttctaacaaaacctcccaa
gatggttgtgcatcaaaaaccacagagagtgtagcagcagccgcaaaagtcaaagccaag
aagaaaaaaaaggagtctgagagagaaaatgccagtcttcttggaatgataaatgaagat
actactatggcttcccagaagcccttgagggagagagactttgagccactaccaatgctg
ccactgtcaccactaaacgaacctctactcgaatcgttaccacatacactacctcagata
acacaaccgaaagtactatcatttccctcaccaccgccaacaccgctctcagaatcacaa
tctgcaccaacatcaccgatggttttacagagtccagcaccagcacatcagactccatcc
accagaggagttagatatgacaaccaggagacaaacacaaatgaatatgaaatagagtat
atctgggcagagaagtataggcctctacacctgcaggattttctatgcaacaggaaagct
gcacttgaactacaggcagtagtaagaaatcttcacgaaaaaggagaagactttggtcac
ttcatatgtgaaggcaacccaggagtaggaaagagaaccatgatttgtgctttgcttagg
gaagcttttggaccagacaaagtgcaggcaaaagaagaacgcaaggaatttcacttcaag
ggagaagcagtggaaagcatccacgtaaacttaatggtatcacctcaacatactgaagtc
aacctttctgaacttaaaggttacgcaaagcatgtgatacttgaacttatcaatgagaaa
aatcagaattctgacaaagtattgcacagcaaccttgagaacagtagagctattatccta
tacgaagtagacaagctatcaactgattccctgtcgtatatgaaatggatgctagagaag
ttcaaaggatgtaacaaggtatttttctgctgtagtgatgcctcaaaacttgagtctata
aagccactgtgcaggtttattcaactcctcgaacctacaaatgaagagattctgaaagta
ttggcctccatagcacaccaagaagggataaagctacctcaacaattggccgataaaatt
actcagaattccaggaataacctaagacaagctatacgctcattcgaagctacctggaac
ttcaattgctgcaaggcttccctgaagggagctcaacttatcagaactggatgggaagat
acattagccaaaattgcaagaaatgctgtcaaagagcagagcccaaaacagctttacaat
atccgtcaagaacttcaaatacttttagagcacaatgtggctccaggattcctattgcaa
gctctaaaagacgaattaaaaataattcttccacaacatttactgcctcagtttgataag
ttatacgactctaaaaaaaatcatgttaccagaaagtacttggcctccacacatcaactc
gtggaatctggaaaacaaccatgtgatccacgaaagaacgtacacgagttcatgaacatt
gaagagttcatagcgagattcatgagttggtacaaagcttgggtttaa
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