Salvia splendens (scarlet sage): 121765305
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Entry
121765305 CDS
T07627
Name
(RefSeq) cell division control protein 48 homolog C-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121765305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121765305
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121765305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_14
AAA_22
AAA_5
RNA_helicase
AAA_2
nSTAND3
NPHP3_N
Rad17
ATPase_2
ABC_tran
AAA_28
Mg_chelatase
IstB_IS21
NB-ARC
AAA_18
DUF815
AAA_33
NACHT
Bac_DnaA
TsaE
AAA_17
TIP49
AAA_23
Sigma54_activat
PIF1
AAA_29
ORC-CDC6-like
Viral_helicase1
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
121765305
NCBI-ProteinID:
XP_042017332
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All DBs
Position
14:2726445..2734574
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AA seq
746 aa
AA seq
DB search
MASGHREKLSMAGLSDRIARSLLECHDQTLRCLIEPAAAGAKNLSDAQIVQLICSTFPLT
FSRSNCNLLIERVAKISPLSCRRESAGDEPAAKKPKFNESQNANRQIEVAKASASASYSD
SNGWELDSARSYRYGGDGWDTDANGDNMAIIGGFVQGNKLGNNMRELKKNEDKWPMFSDI
GGRYSMLEVLKRDVIAPMHQLKVLRFIGGKPSTSILLHGPPGCGKTMLARAIGNEARVPF
YETSAVALKSGVSGILELFSRAYKNAPSIVFIDEIDALTSETESLWQCPAKQLMACMKES
VNAGSDSERSNSGRGGYVLTIGATNKPNALDLALRQRFDREFYLDVPKNHQRHDILSVLT
SKYKVDDDFDLKELARLTQGFVAGDLVELVNKARMISFNCAIHLRAHIKGFKDGFEAYGI
AFSNEELEKVRLTRDSIDQAIETVWPSAEMEEFSTTPCTNWDDVGGLQLLKLELERRIVK
LIKFPQVYESLWESGVKNFPTSFFLYGPSGCGKTLIVDALAKEAGANLMHIKGNELSKFE
WRQLMVNNIFKCAKTHPPCIVFFDEVDVLSRDDFTDEDLEEDEYLWKSWEYRSIWAQVSD
LKKESRVYVIVTSSRPEILELIPLIKDDFGRTLYAPLPTPEERGEILKILARNKPIDVEV
DLMALGKDAACENFSGSDLFALMTEAIKFAIDRPALSCGGSMTITNADFEAALAKVSPSL
STEERNKWVLHAKKIDVVHGASAMDW
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggtcaccgggaaaagttgagcatggccggattaagcgaccgcatcgccagg
tctctccttgagtgtcatgaccaaactctgcgctgtctcatcgagcccgccgccgccgga
gccaaaaacctaagcgacgcgcaaatcgtgcagctcatctgctccaccttccctctgaca
ttctcccgctccaactgcaacctcctaatcgaacgcgtcgcgaaaatatctccgctctcg
tgcaggagagagagcgccggggacgagccagcagcgaaaaagccaaaattcaacgagagt
cagaatgcgaatcggcaaattgaggtagctaaggcttctgcttcagctagttattctgat
tctaacggttgggaacttgattctgctaggagttatagatatggtggtgatgggtgggat
acggatgctaatggggataatatggctataattgggggtttcgtgcaaggaaataaatta
gggaataacatgagagagctgaagaagaatgaggataagtggccaatgtttagtgacatt
ggtgggaggtattctatgttggaggttttgaaaagagatgtgattgcgccgatgcaccag
ttgaaggtactgcgtttcattggaggcaaaccttcaacatcaattctgttacatgggcca
ccgggctgtgggaaaaccatgttggctcgagccattggcaatgaggcccgagtaccgttc
tatgaaacatctgctgttgcgttgaagtctggagtgtcaggtatcctagagttgttctcc
agagcatacaagaacgcaccatctattgtgttcattgatgaaattgatgcattgacttca
gaaacggaaagtttgtggcagtgcccagcaaaacagttgatggcttgcatgaaggaatct
gtgaatgccggttctgattctgaaagatctaatagtggacgtggtggctatgtgctgacg
attggagcaaccaataaacctaatgctcttgaccttgccttaaggcagcggtttgatcgt
gaattttatttagatgttccaaaaaatcatcaacggcatgacattttatcagttctaaca
agtaaatataaggtcgatgatgattttgatttgaaggagttagctaggttgactcagggt
tttgtagcaggagatttggtagaactagtaaataaggctcgtatgatttcttttaattgt
gccattcacttgagagctcacataaagggctttaaagatgggtttgaagcttatgggata
gcattttcaaatgaagaattggagaaagtcagattgacccgggacagtattgatcaggct
attgagacggtttggccatctgctgaaatggaagaattttccaccacaccatgtacaaac
tgggatgatgttggaggccttcaattgttgaaattagaactggaacgccgcatagttaag
cttataaagtttccacaagtttatgagtctctttgggaaagtggggtgaagaactttcca
acctcctttttcctttatggtccttcgggttgtggaaagacattgattgtcgatgctttg
gctaaagaagcaggagcgaatttaatgcatatcaagggcaatgaactatcaaagtttgag
tggaggcagttgatggtgaataatattttcaaatgtgcaaaaactcaccctccatgtata
gttttctttgatgaggtggacgtgttatcccgagatgatttcacagacgaagatctagag
gaggacgaatatttatggaagtcatgggaatatagatcgatatgggcccaagtcagtgat
ttaaaaaaagaatcgcgtgtttatgtgattgtaacatcaagtaggccagagattctggag
cttatcccgctcatcaaagatgattttggtaggactttgtatgctcctcttcctactcca
gaagagagaggagagatattgaagattcttgctcgaaacaagccaatagatgtcgaagtg
gatctgatggctctaggaaaagacgccgcttgtgaaaatttcagtggctctgatctattt
gcattgatgacagaagctattaagttcgccattgatcgaccggcattgtcctgtgggggt
agcatgaccatcacaaatgcagattttgaggccgcgctagctaaagtctccccttctctc
tcgaccgaggaacgcaacaaatgggtgctacacgcgaagaagattgatgttgttcatggc
gcatctgcgatggactggtag
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