Salvia splendens (scarlet sage): 121765358
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Entry
121765358 CDS
T07627
Name
(RefSeq) sister chromatid cohesion 1 protein 4-like isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121765358
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121765358
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
121765358
NCBI-ProteinID:
XP_042017407
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Position
14:31080547..31087927
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AA seq
1174 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILSPDVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLNVKQAFRSAAVDLPPEQSKAPYHSITLPETFDLDDFE
LPDNEIFHGNFVDHHISSREQITLQDTLDGVTYSTSKFGLDERFGDGDASGLDLDEELFL
DKDGTAGLENERCDPQASVGPMTPLKQDEHPEIRNADSGTKVDDADDYDDLINAQAPSTP
GLVEEPNLSNVQEVSAFDDHMEAECRLGESTVIENADNNINEDKQEADWSSHDNKICDAV
PVVPPEDNGHQSGGLDVDSSKPLGESLTEANMEHDPVETLAVGQGKSVNSSLELDDKING
ASQGPCQNTDADGMNSIRPVDEDDHHQGPFTGIEKSAREISGEASNYHQDETFPQNRDTG
ASNELGDPNSSNLDVHEKVASSETPFLRPCNSNMEQPDFVCKYALSADAAVQSDVINLAT
SEAEEMVMIGKGCSGADNPEELLEKHMQEHALREGTDTGFNKPNSHVTNAGAHDALVDNL
NSSAEADLPAPEKLLSVPEDINQHNNMFTEMGSGVFVGLDASDAGSKIISGKKRSFTEST
WTEQSLNSVESSRLVRFKRTVESVPDDDDLLSSILVGKSSVLKVKATPRPSEAASTKCTR
ATQRTSVPKRKVFMDDTMVLHGDVIRLQLTNSEDIRRVRKKAPCTQSEISLIQKKYLEDD
CFLGPLFTGISIELESLHSHTWNLSGIRVCNNEPTDSSLGNVADARLPSKEVPPEDSKEN
NDYFHATVAEPHSTSQDAENCEAMDNGMHNAAEQNRVTIANELSSHRDSETPLLTDNGVN
KVRDMNVEIDTCDKQSKPNGDVEADVSKHEPLVDVSGWEMSEKSKRASDFPAGVVQLNPA
TETCEELTFVNADLSTGLPDQERDAPSVELHYAMMDADNRQAIEDVLIARDGDVNAGLET
EPLERDDVFLGVAQENVTVEAQSNSKQELEFDEYNQTRNAIFGENIEFSSFTADQDYAFM
DNIRSPEQPEAHYHDMMGAESSGFNMHNQEEWKYSAAENDTDFLNVDDDELNEMVDDQDI
ADEEETRFIENTGWSSRTRAVSKYLQTLFVKEAEQGRRSLNLEHLLVGKSRKEASRMFFE
TLVLKTRDYIHVEQQVSFDGIALKPRTRLMKSNF
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcacaatttatattggcaaaaaaggggcctttgggaaccatttggatagca
gctcatttggaaaggaagctccgcaagaatcaagttgctgatactgatattggggtatca
gtagactctattctttccccagatgtgcccattgcacttcgtttgtccagccatcttcta
cttggcgtggtgaggatatattctcggaaggtgaactacctatttgatgattgcagtgag
gctttacttaatgttaagcaagcttttcgttctgctgcggttgatctaccaccagaacag
tcgaaggccccttatcactccatcaccttgcccgaaacgttcgaccttgatgattttgag
ctgccagataatgaaatcttccatggtaattttgtagatcatcatatcagttcaagagag
caaataacccttcaagatactcttgatggcgtcacttactccacgtcaaagtttggtctg
gatgagaggtttggagatggtgatgcttctggtttggaccttgacgaggaattgtttttg
gacaaggatggcactgcaggacttgaaaatgaaaggtgtgatcctcaggcttcggttgga
ccgatgacacctctcaagcaagatgagcatcctgaaattaggaatgctgattcaggaacc
aaggttgatgatgctgatgactatgatgatctcataaatgcacaggctccatctacccct
gggctggtggaagagcctaatttatccaatgtccaagaggtttcggcctttgatgaccat
atggaagcggaatgtcgtttaggggaatctactgtgatagaaaatgcagacaacaatatt
aatgaggataaacaagaggccgattggtcttctcacgataataaaatttgtgatgcagtt
ccagtggtgccacctgaggacaatggccatcagtcaggtggcttggatgttgattcttcg
aagccactaggagaatctcttactgaagctaatatggaacatgatccggtcgagacttta
gcagttggtcaaggtaaatctgtaaactcttctttggagttggatgataaaatcaatggg
gcatctcaaggtccctgccagaatacagacgctgatggtatgaactcaattcgcccagtt
gacgaggatgatcaccatcaaggcccctttaccggcattgagaaaagtgctcgtgaaatt
tctggtgaggctagcaactaccaccaagatgaaacttttccacaaaatcgtgatactggg
gcctctaatgaactgggagatccaaactcgtcgaaccttgatgttcatgaaaaagtggca
tcttctgagactccttttctaagaccatgcaattctaacatggaacagcctgattttgtt
tgtaaatatgccttgtcagctgatgctgctgtacaatctgatgttatcaacttggcaact
tctgaggcagaggagatggtaatgataggtaaaggatgctctggagctgataatccagaa
gaacttttggagaagcacatgcaagaacatgcactgcgagaaggcactgatacaggtttc
aacaaacccaatagtcatgtaacgaatgccggtgcacatgatgctctggtggataatcta
aatagttctgcagaagccgatctgcctgcaccagaaaaattgttatccgtaccagaagac
ataaaccaacataataacatgtttacagagatgggctccggtgtgtttgtcgggcttgat
gctagtgatgctggaagcaaaatcatttctggcaagaaacgcagttttactgaaagtaca
tggacagagcagagtctgaactcagttgaatcttcaagactagttcgttttaaaagaacg
gtcgaatctgtgcccgatgatgatgatttattgtcttccattttagtgggaaaatcatca
gttttaaaagtgaaggcgacacctcgtccttctgaggcggcatctactaaatgtactcgt
gctactcaacgtactagtgttcccaaaagaaaagtatttatggacgacactatggtattg
catggcgacgtgataagactgcagctgacaaactctgaagacatacgccgtgtgagaaag
aaagctccatgtacgcagtctgagatttctttgattcagaaaaaatacttggaagacgat
tgttttcttggaccactatttactggaatatcgattgagttggaatctttgcacagtcac
acatggaatttgagtggcattcgagtgtgtaacaatgagccaactgactcttctcttgga
aatgttgctgatgcgaggctaccttctaaagaagtaccacccgaagacagcaaagagaat
aatgactattttcatgcaactgtagccgaaccacattcgacgtctcaagatgctgaaaat
tgtgaggccatggacaacggaatgcataatgctgcagaacaaaatagagtgacgatagcc
aatgaactttcgtcacacagagatagcgagactcctcttctgactgataatggggttaac
aaagttcgtgatatgaatgtagaaatcgacacctgtgacaagcagagtaagcccaatggt
gatgtggaggctgatgtttcaaaacacgagcctttggtagatgtaagtggatgggaaatg
agcgagaaaagcaaacgtgcctctgattttccagctggtgtcgttcaattgaatcctgca
actgagacttgtgaggaactcacttttgtgaatgccgacttatcaaccggtctacccgat
caagagagggatgcaccctctgttgagttgcactatgcaatgatggatgccgacaacaga
caagccattgaagatgtactaatagcaagggatggtgatgttaatgcggggcttgaaact
gaacctctagagagggatgatgttttcttaggggttgcccaagaaaatgtcactgttgag
gcacagtcgaattctaaacaggagttggagtttgatgaatacaatcaaacgcgcaatgct
atattcggggaaaatattgaattttcttcattcacagcagaccaagattatgcttttatg
gataatatcagaagccccgaacagccagaagctcattatcacgatatgatgggtgcagaa
agttctggcttcaacatgcacaatcaagaggaatggaagtattccgctgctgaaaacgac
actgattttctaaatgttgatgatgacgagctaaatgaaatggtcgatgatcaagatatt
gctgatgaggaagaaacaagattcatagagaacaccgggtggtcttcacgtacaagggcc
gtttccaagtatctgcagacattgttcgttaaagaggcagagcaaggaaggagatctctt
aacctagagcacctcttagttggtaaatcacgcaaagaagcttcgaggatgttttttgaa
acattggttctcaaaactagagactacatccatgtggagcaacaggtctcctttgatggg
atcgccttgaaacctcgaacaaggctgatgaagagcaacttctga
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integrated database retrieval system
