Salvia splendens (scarlet sage): 121765590
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Entry
121765590 CDS
T07627
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121765590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121765590
Spliceosome [BR:
sspl03041
]
Common components
Common spliceosomal components
SR proteins
121765590
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
121765590
NCBI-ProteinID:
XP_042017724
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All DBs
Position
14:3180959..3183355
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AA seq
235 aa
AA seq
DB search
MFRHRFMFNSDPVAGFCFVYMEDERDAEDAIRRLDRVEFGSKGRRIRVEWTKQERGSRRP
ESTRKSSSSARPSKTLFVINFDPINTRTRDIEKYFEHYGKISNVRIRRNFAFVQYELQED
ATRALEETHLSKFMDRVISVEYAIRDDDDKRNGHSPDGRGRDTSPDRRNYDRRRSPSPYQ
RDRGSPDYGHGSLPNARSERRGSPQYGRAESPANDRYNSRSPPPPRERSRSRSRS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgacatagattcatgttcaattcggatccagtggcaggcttctgcttcgtctat
atggaagatgagcgggatgcagaggatgcgatccggaggcttgacagggtagagtttggc
agcaaagggcgcagaattcgtgtggagtggaccaagcaagagcgtggtagcagaaggccc
gagagcaccagaaaatcttcttccagtgcacgaccttctaaaacattatttgtcattaac
tttgatcccatcaatactaggaccagggacattgaaaagtattttgagcattatggaaag
atatccaatgtcaggatcagaaggaactttgcgtttgtgcagtatgagctgcaggaagat
gcaacccgagcattggaggagactcacttaagcaaattcatggatcgagttatatcagtg
gaatatgcgatccgggacgatgatgacaaaagaaatgggcacagccctgatggaagagga
cgtgacacgtctcctgatagaagaaactatgatcgcagacgttccccaagtccctatcaa
agagataggggtagccctgactatggacatggatctctaccaaatgctagatcagaacga
aggggcagtcctcaatatggaagagcagaaagccctgccaatgatagatacaacagtcgt
tcacccccgcctccacgtgagaggtctcgatcacgatcccggtcttga
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