Salvia splendens (scarlet sage): 121766016
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Entry
121766016 CDS
T07627
Name
(RefSeq) SWI/SNF complex subunit SWI3A-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121766016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121766016
03036 Chromosome and associated proteins [BR:
sspl03036
]
121766016
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121766016
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121766016
PBAF complex
121766016
GBAF(ncBAF) complex
121766016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
SNAPC3
Motif
Other DBs
NCBI-GeneID:
121766016
NCBI-ProteinID:
XP_042018281
LinkDB
All DBs
Position
14:27065973..27069517
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AA seq
565 aa
AA seq
DB search
MERITPELELYTIPSYSSWFSWINIHEVEKFSLREFFDSSSITRTPRIYKEYRDFIITKY
REDPSRKITFTEVRKSLVGDISVLHKVFTFLEKWGLINFNVSGSHEGGNSREGASFGGKE
EEEEGDWKGRMKVEEGAPHGVRVVAAPNSMKPLVPPPQPPPSVGGDGGGVVGEVGESGFK
WPPLASYSDVYGELMLQEERNKGGVVCGNCKENCDSKQYEYTKEGSFILCEKCFESGNYD
KEKSADDFKLKDTVNQAVGWTEEETLLLLESILKHGDDWDLVSKNVQTKSKLECITKLML
LPFGDLMLRGGLGKGGLLDIIGYGKQAAVPSSESLESVKAEEPSSEVQNNDQQNGDANCE
GPLRKRVCTGPTSDAGNYMMKQVTRISSMLDPHITASAADAAVISLCYENQCSRELFDDN
DGKFFDSIASPEASNPERDTDCDADNAEEDKSPNQSEISGISSAKNIIPLNLKTRAATAT
ALGVAAANAKMLADKEEKEIGNLVAIMIETQLKKLQGKVKHFEDLELIMGNENAQLEEAE
QSLIMERLDVLQRAFDAGIPRSKGA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaatcactccagagttggagctctacaccattcccagctactccagttggttc
tcttggattaacattcacgaagtggagaagttttctctgcgcgaattcttcgacagcagc
tcaatcaccagaacgcccagaatctacaaagagtacagggacttcatcatcaccaaatac
agagaggacccttcgagaaagatcactttcaccgaggtccggaagtcgctagtgggcgac
atcagcgttctccacaaagtttttacgtttttggagaaatggggtctcattaatttcaac
gtttctggtagtcatgaggggggaaatagtcgcgagggggcgtcgtttgggggtaaggag
gaggaggaagagggggattggaaggggcggatgaaggttgaagaaggtgcccctcatggg
gtgagggtggtggcagcgcccaattctatgaaaccgctagtgccgccgccccaaccgcct
ccttctgtgggtggggatggtggcggggtagttggggaggtgggagagagtgggtttaag
tggccgccgttggcctcttattctgatgtttacggggagttgatgttgcaggaggagagg
aacaagggtggtgtggtgtgtgggaattgtaaagaaaattgtgattctaaacagtatgag
tatacgaaggagggaagttttattctttgtgaaaaatgcttcgaaagtggaaattatgac
aaggaaaaatcggcagatgacttcaagttaaaagatactgttaatcaggcagttggctgg
acagaggaggaaactctacttctcttagaatctatcttaaagcacggagatgactgggat
cttgtttctaagaatgttcagacgaaaagtaaactggaatgcatcacaaagcttatgctg
ctgccatttggcgatcttatgttgcggggtggtcttggaaagggtggattattggatata
attggttatggcaaacaagcagcggtaccttctagtgaatcactagaatctgtgaaggct
gaggaaccaagctccgaggttcagaataatgatcagcagaacggagatgccaattgcgaa
ggtcctctaaggaaacgagtgtgcactggaccaacttctgatgctggaaattatatgatg
aaacaggtaactcgcatttcctcgatgttggatccacatatcacagcttcggcagctgat
gctgctgttatttctctttgctacgagaaccagtgttcaagagagctatttgacgacaat
gatggcaaatttttcgattcaatagcctcccctgaagcaagtaatcctgagagagacact
gattgcgatgctgataatgcagaagaagataaaagccccaatcaatcagaaatttcgggg
atatcatctgcgaagaatataattccactaaatttgaaaacacgggctgcaactgcaaca
gcacttggtgtagctgctgcaaatgcgaagatgttggctgataaggaggagaaagagatt
ggaaacttggttgctattatgattgagacacagctcaagaaactgcagggcaaggtgaag
cattttgaagatctcgagctaattatgggaaacgaaaacgcccaacttgaagaagccgag
caatctcttatcatggagagactggatgtgttacaaagggcgttcgatgctggtataccc
agatcaaaaggagcataa
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