Salvia splendens (scarlet sage): 121766328
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Entry
121766328 CDS
T07627
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-like
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121766328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121766328
Spliceosome [BR:
sspl03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
121766328
Complex B
121766328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
121766328
NCBI-ProteinID:
XP_042018528
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Position
15:complement(6460696..6463011)
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AA seq
203 aa
AA seq
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MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANIRSYYQKFEEQQTQILIDQKIKEHLGQ
TVVYQQIGAVYNQHLAAFPGARPRLPVMPPPMFPGPPQMVPGIRPPMLPIPVPGAPGYGN
SPMVPMQPPPAPLLPPQTGGLPPPPSTSTPLPVPGGTEGGQPSSSSGAPPNATQMFNANP
PGTSATSAAAGGYSYPQYSQTGH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggtactactgtgattattgcgacacttacttgactcatgattctccgtctgtc
aggaaacagcataattctggctacaaacataaggcaaacataagatcctactaccaaaag
tttgaggaacaacaaactcaaattttgattgatcagaagatcaaggaacatcttgggcag
acagtagtataccaacagattggtgcagtttataaccaacatcttgctgcttttcccgga
gcaaggccgcgcctacctgtcatgccacctcctatgtttccgggaccccctcagatggtc
cctggtatcaggcctccaatgttgccaatacctgttcctggtgctcctggttatggaaat
tctccaatggtgccaatgcagcctcctcctgcccctttgctgcctccgcaaaccggtggg
cttccacctccaccaagtacgagtactccattaccagttccaggaggaactgaaggaggc
caaccctccagctctagtggtgcgccacctaatgctactcaaatgttcaatgctaatccc
cctggaacttctgctacttctgcagctgccggtggatattcttatccacagtactcccaa
actggtcattag
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