Salvia splendens (scarlet sage): 121766564
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Entry
121766564 CDS
T07627
Name
(RefSeq) KH domain-containing protein HEN4-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121766564
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121766564
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
Secretin_N
Motif
Other DBs
NCBI-GeneID:
121766564
NCBI-ProteinID:
XP_042018767
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Position
15:25661188..25665771
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AA seq
642 aa
AA seq
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MEETTLTTPFPPQKIPKSGPKQPAASHRSSAAAKQIHPDAPAAGQAAYRLLCHVHTAGGV
IGNSGSIIKQLETLTGSRIRFEEGLPNCHERVVNIVGDGALERKISVSGGEDEDTVSVSR
AQEGLIRVFERVLEVEGSTGKNDNGGDDNEHRNNNNSNGLIVCRLLAPTVQIGALMGKGG
KIVAAIRKSTGAKIRVFKKEKVPPCAAPEEELIQIVGGLLAVKKALLAVSRRLQDRILGE
GAPGHISTHGALQNSYSDFNVKNNNSTMPVSDTAVEHCSVDHSLLADTEKYLNVDDKSSL
KKVIFRFLCSSGIAGGVIGKGANIVKYLEKETGASIKFASPVSGSRERLAIISSLESPNP
LYSPAQIAIVRVFSRCVEVALDQGAIMSFGRGESVSARILVSSSQLSSILDGDGKLATDI
SLASGAEIQLMGTDLPDFAGVGDNVVQISGDYENVKSALFQLAGRLRENFFFRIGYKGAG
SRHSLYSTVSSSIPTGGEAAFSTQSVQLSRLSHIDELDHLGFVQKTSSSWLPGLQCEQAN
NIESQPRPVDGSKETFPSGFKQESNIVNDGSEQKVEVVVPREKFGSVYGDDGSNLTRLRE
ISSAVVTVVDPSHGEGSGKVIISGTPECIRIAQSLLQAFISF
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggaggagacgactctcacgactccctttccccctcagaaaatccccaaatcggggccc
aagcagccggcggccagccaccggagctccgccgccgctaaacagatccaccccgacgcc
cccgccgcggggcaggcggcgtaccgcctcctgtgccacgtgcacaccgccggcggcgtg
attgggaactccggctccataatcaagcagctggaaaccctaaccggctcgaggatacgc
ttcgaggagggcctccccaattgccacgagcgcgtggtcaacatcgtcggcgatggcgcg
ttggagaggaagatatccgtcagcggaggcgaggacgaggatacggtgagcgtctcgaga
gcgcaggagggtttgattagggtttttgagagggttttggaggtggaagggagtactggg
aaaaatgataatggaggagacgataatgagcatcgcaacaacaacaatagtaatgggttg
attgtttgccggttacttgctccgacagttcaaatcggagcgctgatgggaaaggggggc
aaaattgttgcagccattcgcaaaagcacgggtgccaaaattcgtgttttcaagaaggag
aaggttcccccttgtgctgcaccggaagaggagctgattcagattgttggtggacttctt
gctgttaagaaagcactgcttgctgtttctcgtcgtctccaggatagaatccttggtgaa
ggagctcctggtcatatatcgactcatggggcattacaaaattcatactcagatttcaat
gtgaaaaataataattccacaatgcctgtttctgataccgctgttgagcattgttctgtt
gaccattctttgttggcagacactgaaaagtatcttaatgtagatgataaaagctctctg
aagaaagttatcttccgatttctttgctctagcggaattgctggcggtgtcattggaaag
ggtgccaacatcgtcaaatatttggaaaaagaaacaggagcttctataaagtttgcatct
ccagtgtcggggtcaagggaacgccttgccatcatctcttctttggagagtccaaatccg
ctgtattctcctgcacagatcgctattgtccgtgttttttccagatgcgtagaagttgcc
ctggaccagggggcgataatgagcttcggccgtggggagagtgtatcagcaagaattctc
gtttcatcaagccagcttagcagtatactggatggggatggaaagcttgctacagatata
agtcttgcatcaggcgctgagatacaacttatgggaacggatcttccagattttgctgga
gttggtgataatgtggtccagatttcaggtgattatgaaaacgttaagagtgctctattc
caacttgctgggaggcttcgggagaatttcttttttagaataggatacaaaggagcagga
agcagacatagtttgtactcaactgtttccagcagcattcctactggtggagaggcagct
ttttcaacacaatctgtacaactgtctagactttcccatattgatgaattggaccacctt
ggatttgtgcagaaaacaagcagctcttggctaccaggattgcagtgtgaacaggcgaac
aacatagagagtcaaccaagacctgtagatggttctaaagaaacttttcctagtgggttc
aagcaagaaagcaatattgtgaatgatggatcagaacaaaaggtcgaagttgtggttccc
agggaaaagtttggctctgtttatggtgacgacggaagcaacctgactcgtttaagagag
atatcaagtgcagtcgtgacagtggtagatcccagccatggggaaggcagcggtaaggtg
atcatatcagggacacctgaatgcatccggatcgctcagagcctacttcaagcgttcatt
tcattttga
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