Salvia splendens (scarlet sage): 121766831
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Entry
121766831 CDS
T07627
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121766831
03036 Chromosome and associated proteins [BR:
sspl03036
]
121766831
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121766831
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Helicases
121766831
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121766831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
CMS1
ResIII
Motif
Other DBs
NCBI-GeneID:
121766831
NCBI-ProteinID:
XP_042019003
LinkDB
All DBs
Position
15:19670544..19678767
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AA seq
473 aa
AA seq
DB search
MRLLTILLGKTLAFVLPILESLTNGPAKESRKTGYGKAPSVLVLLPTRELAAQVAADFEV
YGGALGLSCCVLYGGSSYGPQLNQLKRGVDIVVGTPGRIKDHLESGNIDFRSLKFRVLDE
ADEMLRMGFVDDVELILGKVEDSSKVQTLLFSATLPSWVKQISSKFLKPDKKTVGLVGNE
KMKASTNVRHFVLPCTASARTQLIPDIISCYGSGGRTIIFVETKDSVSTLSGVLPGARSL
HGDIQQSTREVILKAFRPGKFSTLVAKDVAARGLDIDDFQLIIQCEPPRDVEAYIHRCGR
TGRAGKSGVAVMLYDHRKSNFARIERESGVKFERISAPQPSDIAKSAGVEAAEKINEISD
SVIPIFKAAAEELLDSSDLTPTDLLAKALANAAGYTEIKSRSLLTSLENHVTVLLECGRP
IFSPSYVCGALRRFVPEDKVESIQGLSLTADGKGAVFDVATEDLDTFLAGQGV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttctaaccatccttttgggtaaaacgttggcctttgtgttgcctatactagaa
tcattgacaaatggtcctgctaaagaatcgaggaagactggatatggaaaggcaccaagt
gttcttgttctcttgcccacgagggagttggccgcacaggtggctgcggacttcgaagtt
tatggcggagctctggggttgagttgctgtgtcctgtatggagggtcttcttatggaccg
cagctaaatcaattgaaaagaggtgttgacattgttgttggcactcctggtcgcattaag
gatcacttagagagcggaaatattgactttcgatccttaaagttccgagtgcttgatgaa
gctgatgaaatgctgaggatgggttttgttgatgatgttgaactcattcttggcaaggtt
gaggattctagcaaggttcaaacgcttctttttagtgctactttgccgtcctgggtcaag
caaatatcttccaaatttttaaaaccagacaagaaaactgttggccttgttggtaatgag
aaaatgaaagccagcaccaatgtaaggcattttgtccttccctgcactgcatctgccaga
actcagctcattcctgatatcattagctgttatggcagtggaggacgcactattattttt
gtagagactaaggattctgtttccacactatctggtgtgcttcctggagcacgttcgttg
catggtgacatacaacagtctacccgtgaggtaattcttaaagcattcagaccaggcaaa
ttttctacccttgtggctaaagatgtagcagcacgaggattagacattgatgattttcag
ttaattattcagtgtgagcctcctcgtgatgtagaggcatacattcatcggtgtggaaga
acaggaagagctgggaaaagtggtgtcgctgtgatgctttatgatcataggaagtctaat
tttgccagaatagaaagagaatcaggtgtgaaattcgaacgtataagtgctccacagcca
tctgatatagctaaatcagctggtgttgaagctgctgaaaaaatcaacgagatttctgat
agtgtgattccgatattcaaagctgctgctgaagaactactcgactcttctgatttaacc
ccaacagaccttcttgctaaagctttggccaatgctgccggttataccgaaatcaagagt
cgatcacttctcacctcattggagaaccatgttactgtactgctcgagtgtggaaggccc
attttctcaccttcgtatgtttgtggagcgctgaggaggtttgtacctgaagataaggtt
gaatctattcagggtctttcgttgactgcagatgggaagggtgctgtattcgatgtagct
accgaagatctcgatacattccttgcagggcagggggtgtga
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