Salvia splendens (scarlet sage): 121767129
Help
Entry
121767129 CDS
T07627
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspl03000
]
121767129
Transcription factors [BR:
sspl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121767129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
DUF7128
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
121767129
NCBI-ProteinID:
XP_042019257
LinkDB
All DBs
Position
15:11729149..11733372
Genome browser
AA seq
534 aa
AA seq
DB search
MAASSSSPFLSLRDENEQPQQQQLLPSAAAAPPSAAPANKRRRNQPGNPNPDAEVIALSP
KTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLRQKSTKEVRRKVYLCPEPSCVHH
DPSRALGDLTGIKKHYSRKHGEKKYKCEKCSKKYAVHSDWKAHSKTCGTREYRCDCGTLF
SRRDSFITHRAFCDALAQESARNLNPPSLSSIGSHLLGLSQHDQMNQGALSSHDILRLGR
PGQQYETLVSPGGFHPSPRGLFLHPNHDHDHQDHQNQSPHSAMLPNKSSLQSLMQLPQLH
MNNTANTSSNSSAAGLFNLSFFPGNNNNAASTIDGGSHHSAAGYDSTLFSSGNLMSIAIP
SLYSTSQAMQTPSGGQMSATALLQKAAQMGSTATNNGGASSSLLKSFGKSPDHHSFGGSG
VYGGSNSGSGNHLHDLMMNSIAAAEGGSAASMFEQAEMEEYRGFHGGNSNSQQSGFSSLE
QAGRLTRDFLGVGEIVRSVREQQQQQSGMEHLGSLDLQGKTTSHTQPFGGRSFQ
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttcttcttcctcgcctttcctctcattaagagatgaaaacgagcagccacag
cagcagcagcttctgccttcagcagccgcggcgcctccttcggctgcgccggcaaacaag
aggcggcggaaccagccgggaaatccaaatccggatgcggaggtaatcgcgctgtcgccg
aagacgctaatggcgacgaaccggttcgtgtgcgaggtctgcaacaaaggcttccagagg
gagcagaatctgcagctgcaccgccgcggccacaacctgccgtggaagctccggcagaag
agcaccaaggaggtgcggcggaaggtgtatctctgcccggagccgagctgcgtccaccac
gacccgtcccgggccctcggcgacctcaccggaataaaaaaacactactcgcgaaaacac
ggcgagaagaaatacaaatgcgagaaatgctccaaaaaatacgccgtgcattccgattgg
aaagcccattccaaaacctgcggcaccagagaatacagatgcgactgcggcactctcttc
tccaggcgtgacagtttcatcacacaccgagccttctgcgacgcgctggctcaggagagc
gcgcggaacctgaacccgccctccctgagcagcattgggagccacctcttagggctctcc
cagcatgatcagatgaaccaaggagccctatcaagtcatgacatactcagattgggcagg
ccaggccagcaatacgaaaccctagtcagcccgggagggttccacccttcgccccggggc
ctattcctgcacccaaatcacgatcacgaccatcaagatcatcaaaatcaatctccccat
agtgccatgttgcccaacaagtcatcattgcaaagcctcatgcagcttccccagctccac
atgaacaacactgccaatacctcctccaactcctccgccgccggtctcttcaacctcagc
ttcttccccggaaacaacaacaatgccgcctccaccatcgacggcggctctcaccactcc
gctgctggatatgattccaccctcttctcatcaggtaatctcatgagcattgcgatccca
tcgctgtacagcacatcgcaggcaatgcaaacccctagcggagggcaaatgtcggcgacg
gcgcttctccagaaggctgctcagatgggctccaccgccaccaataacggcggtgcctcg
tcgtccctgctaaagagcttcgggaagtcgcccgaccaccacagtttcgggggcagcgga
gtctatggagggagcaatagcggcagcggcaaccatctgcacgacttgatgatgaactcc
atcgcggcggcggagggaggctcggccgcgtcgatgttcgagcaggcggaaatggaagag
tacagagggttccatggcgggaatagcaatagtcagcagagtggattcagcagcttggag
caagcggggaggctgacgagggattttcttggagttggagagattgtgagaagcgtgaga
gagcaacagcagcagcaaagtgggatggaacatctcggctctttggatttgcagggaaaa
acgacatcgcatacccaaccttttggagggaggagttttcagtga
DBGET
integrated database retrieval system
