Salvia splendens (scarlet sage): 121767489
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Entry
121767489 CDS
T07627
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121767489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121767489
Enzymes [BR:
sspl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
121767489
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
121767489
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
121767489
NCBI-ProteinID:
XP_042019693
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All DBs
Position
15:1964360..1970826
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AA seq
778 aa
AA seq
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MVGSESLSSLPSLSPPPAEKKQPPKQWGVTKPLSLAGPIDADVQRNKELEKFLVELGLYE
SAEESAKREAVLALLKQIVKDWVKELTRLRGYTDQMVEDANAVIFTFGSYRLGVHGPGAD
IDTLCIGPSYVNREDDFFFVLHNILAKMEEVSELHPVPDAHVPVMKFKLDGISIDLLYAS
ISLLVIPDDLDISNISVLYDIDEPTVRSLNGCRVADQILKLVPNVKNFRITLQCLKFWAK
RRGVYSNVMGFLGGVNWAILVARLCQFYPKANPSMLVSRFFRVYTLWRWPNPVMLSAIED
NELGFSVWDPRKNPWDRNHLMPIITPAYPCMNSSYNVSSSTLRVMAEQFQFAKEICEDIE
LNKLQWNALFEQYLFFESYKNYLQVDIIASDLDDLRSWRGWVESRLRQLTLMIERDTTGK
LQCHPYPHDYVDSSKQCAHCVFFMGLQRKQGEVIQEGQQFDIRKTVDEFRHHIKSYVYWK
PGMDIYVSHVRRKQIPSYVFPEGYKRSRHTRSLSQQQVEKNSSEGSEGCRPESAERIPKR
KKGCDGSEVDGSPEKRPSISPQRQVSVSPEFICSRDSLSGSCSLLFEKTKEKPSVMVESL
LVNEMAKEVVLVVTEDVQTKSNGNDLQFDDCDKEMNPNPIQMQSNQGMHCTEFSDASYIP
SSGTSQHLSSSNSMEIDNEGSSLDRSREDNAQLLMDNGCENGASILGDGLREELEPNEAL
AMVLISGEGVGSEPVEKNAVRHVYNNLESTCTFFITTIQYSLYASLSWLLLSINATTG
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggttggatcggaaagtttgagctcattgccttctctgtcgcctccgccggcagagaaa
aagcagccgccaaagcagtggggagtaaccaaacccttgtcgctagctgggccgattgat
gccgatgttcagaggaacaaggagttggagaagtttttggttgagttggggctttacgag
agtgcagaagaatctgccaaaagggaagcagttcttgcgctacttaagcagattgtgaaa
gattgggtgaaagagcttactcggttgaggggatacaccgatcaaatggtggaagatgcc
aatgctgttatttttacttttggttcttatagacttggtgtccatggccctggtgcagac
attgatactttgtgtattggaccatcctatgtcaaccgagaggacgacttcttttttgta
cttcataacattttggctaagatggaagaagtttctgaacttcatccagtacccgatgct
cacgtccctgttatgaaattcaagcttgatggaatatcaattgatcttttgtatgcaagt
atttcactcttggtcattccagatgatttggacatctcaaacatctctgtgctgtatgac
atagacgaaccaactgttcgtagtcttaatggatgccgagtagctgatcaaattctcaaa
cttgttccaaatgtcaagaacttccggattactctgcaatgcctaaagttctgggctaag
agacgtggtgtttattcaaatgtgatgggttttcttggtggtgtgaactgggcaattctc
gttgctcggttatgccagttttatccaaaagcaaatcctagcatgcttgtttctcgtttc
ttcagagtgtatacgttgtggcgctggccaaatcctgtgatgcttagtgcaattgaggat
aatgaacttgggttttctgtgtgggatcctcgtaagaatccttgggatcgaaatcatctc
atgccaatcataacccctgcctacccatgcatgaactccagttacaatgtttcatccagt
actcttcgggttatggcagaacagtttcagtttgccaaagagatctgtgaggatattgag
ctgaataagctgcagtggaatgctttatttgaacagtatttattctttgagagctataaa
aattatctacaggtcgacatcattgcttccgatcttgatgacttgcgttcttggagaggc
tgggttgaatcccgtctgagacagttaactttgatgatagagcgggatacgactgggaag
ttacagtgtcatccttacccacatgattatgttgattcctcaaagcagtgtgctcattgt
gtctttttcatgggcttacaaaggaagcaaggggaggttattcaggaaggccaacagttt
gacatccgtaagactgttgatgaatttagacatcatataaaatcatacgtgtactggaag
cctgggatggatatatatgtttctcatgttcgtagaaagcaaattccttcttatgtgttt
ccagagggctacaaacgaagtcgacatacgagatcattgagtcagcaacaagttgaaaag
aattctagtgaaggtagcgagggctgcagaccagaatctgctgagaggatcccaaaacga
aagaagggctgtgatggatcagaggtggacggaagtcctgagaaaagaccctccattagt
cctcagaggcaggtttcagtctcgccggaatttatttgttcgagagattcattgagtggc
agttgctctctgctgttcgaaaaaacaaaggagaagccatcggtgatggtagaatctctc
cttgtgaatgaaatggccaaagaagtagttcttgtggttacagaggatgtgcaaaccaaa
tctaatggaaatgacttgcagtttgatgattgtgataaagagatgaatccaaacccgata
cagatgcagtcaaaccaggggatgcattgtacagaattttctgatgctagctacatccca
agttctggcactagtcaacatttgagcagcagtaatagtatggagattgataatgaagga
tcttcactggatagatcacgcgaagataatgcacagctgcttatggataatggatgtgag
aatggtgcttctattcttggggatggactacgggaggagttagagcctaacgaagcgctt
gcaatggttctcatatctggagagggagttgggtccgaacctgttgagaagaacgccgtg
aggcatgtttataacaatttggaaagtacatgtactttttttattaccactatacaatac
tctctttatgcttctttgtcttggttacttttgtctattaatgcaacaacaggctga
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