Salvia splendens (scarlet sage): 121767495
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Entry
121767495 CDS
T07627
Name
(RefSeq) uncharacterized protein LOC121767495 isoform X1
KO
K19026
spatacsin
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121767495
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121767495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
121767495
NCBI-ProteinID:
XP_042019708
LinkDB
All DBs
Position
15:19355249..19372621
Genome browser
AA seq
3193 aa
AA seq
DB search
MDLDSRPTEDGLPVLQLRKWDPSEFPYSPSSFREGFISPTRKSLLLLSYDSEALLFPLVK
GRCIGNNDSELFSDEIVADPLESSKPGISEPRESISGSSGTVDLDEKTGYTSGSGVSIQE
STGAFISDVDSVAWGLCRDTFDQHEGASFEELLFVSGRQGVVVHAFSKFGKFSGVIKPEQ
ARDVGQGKWMEWGPSRTLSPDIEVHEEVESHDKITGKRTSDAEAPVRDGRSATPKIWMQT
FLTEVESVTSGGYVYSRYPKMPLFPNDVVVSFRIYDQESPFSDPVSLGDTAPCNHTNPSM
PIMVCTTNRSDTDLSSPVTSVAGDSVSSLKSDVTNGPYKCTKVFSNNLHRLVGFALSNTS
STAVDTGNLNDGNYTKNLVSVARTVSWGIQWLYSAKLDEKLDTGPFEWIDFRFSDRFLIC
LSTSGTISLYGAMTGEYIASLDVFRRNEPGYSSSSWHRIGSLTIRRKFKRLFVFPHSLLL
GVMDESGVIYAVPTDNHVLEDQFSFEDVLPYQYYSDLGLLMGWEVGGAEIGYQRVLSNTS
KAHGISRLAGYGRYSQFIGKENLIKENSHIKDSKGNNGSYLMTFSNATHMLNENKLMLSD
FPSCLIRKAFIPPFGCSEDDVICCSQFGVTRLTKRYSYEKRRCQVVHTNLQLDFNVNDDI
NYVMPTGETSSNEAVGCNFNGCLYLLTRRGLSVVLPSISATPNFFPVEAIGYHIPNCSSS
IMYGAGDLMGTGRTKKPFSPWKVEVLDRVLLYEGLEVAEKLCLENGWVLGISRIRHLQLA
LAYLEFDEIKNSLEVLMRVDMAVEGILRLLFAAFYLMFNKVSNDSEVSAASRLLALATDY
ATRVIRKYGLLHHKKVSEKPLEVSSNEGLYPLLELTEKEHDEEGTSRTLAEAARYLVVIR
SLQQQLNEKFRRPGQVLTVNAGLVNTVGTGRLEDDYKNPAVLEDTSSLIRSDQSGTAAPT
SGTELSNEENLALMPVDTVGADFQDFQNFDKAILVSEGSTYGKRTSRIENPKDMIARWEL
DNMDIKTVVNDALLSSRLPLAVLRLHLHHVNNLLPDTETRDTFNDVRIAGRAIAYDLFVK
GEIGLGTTTLQKLGEDVETTLKQLVFGTVRRSLRVLVAEEMKRYAYLGPQELKILEMLSL
VERVYPCNSFFSTLATRRKGLKRISNEEPLGEISLHLLHPLFDNPVISCGEIDGVVLGSW
TTIDKHSIAAEVDDDTSHAAYWAAAAAWSDAWDQRVVDRILLDQPLLMGVNVLWESQVEY
HVCHNDWLEVSKLLEVVPPYALSPGSLSISLDDIRPASSIEYGQEPPEFNKYSSFLDDLD
TVCMNVQNIRLFRFPTNRSSSVWLRRLMEQQLANKLIFLVDYWDRVSDIVPLLARSGFMS
DLHDTSFLDGANDGSSELLVIGDAPIDPDAMQSLHKVVVHFCAQYNLLYLLDIYLDTHKL
AIDHSSLSFLLDAAGDNEWVKCLLLMRVKGKEYDASFSNARAVAALNSVPGNKLTVEMDD
IVQAVDDIAEGAGEMAALATLMFAPAPLQECLSSGSVKRHCSSAQCTLENLRPALHRFPT
LWNTLVAACFGQDSTCRNLKTKMSGYSELLDYLNWREGVFFSSLRDTSILQMIPCWFPKA
VRRLVQLYVQGPVGWQSLADSETEELSLLRDIYYVVNSSGHAQISATSWEAVIQRHIEEE
LYSSSLEGADVGLEHHLHRGRALAALNHLLSARVHKLKSDNKHWEQPESLSTGQTNIQSD
VQILLSPITESEESLLSSVIPLAIQHFDDSVLVASCAFVLELCGLSASTLRMDIAALKRI
SSFYKSAENNQYMQLSPRSPAFLQPPVEVDLTESIARALADDYLHKYSSSIMQKGDRNNS
VLNQPSRALLLVLQHLEKASLPLPSNSMTCGSWLSSGNGDGAELRSQQKAASQHWQLVTA
FCQMHNIPLSTKYLAVLARDNDWVGFLSKVQIGKYTFETVMQLASKEFSDACLRSHITTV
LRSMQSRKKTAPLNMDTGEKDTNYLSNENLCMPVELFGIIAGCERNERPGEALLLKAKNL
SWSILAMVASCFPDVSPLSCLTVWLEITAARETSAIKVNDIASQISKNVGAAVEATNALS
PGARTITFRYNRKNAKRRRLQEPVPLDTLTSADSISSKSSTFSNTQGFLHEEGSDKIDDK
DAKFWTDSNSMANTLSRMVAVLCEQHLFLPLLKAFEIFLPSCSLLPFIRALQAFSHMLLS
EASAHLGLFSTIIKEEPPLTLPNWEREGKVGNSWTTSTAVKAADAILLTCPSPYEKRCLL
RLLAATDFGDGGSIAARYGQLSWKIDMAEPYMRGDECPLLGNETFDDASLLSALEKNGYW
EQARCWAKKLEASGESRWKSAANHVTEMQAEAMVAEWKEFLWYIPEERVALWSHCQTLFI
RYSFPALQAGQFFLKHAEAVEKDISAKELHEILLLALQWLSGMTTLSNPVYPPHLLREIE
TRVWLLAVESEALVKNEGDVNSLISSAREPGAGKSSDLMDRTASIVAKMDNHMNGLRLKS
SERNDRENGQPHVRMTQTGDGGLKTKRRAKGFASRKPLFDSGDKKYDSESIPLNPRDETH
LVDESSKIDASLSRWEERVGPAELNRAVLSLLDFGHITAARQLQNKLSPDNMPSEFFIVD
AALKLAAHSTSSMKVSMPMLDGDVSSVMQSCNLLTEQQVIDPLQTLESFPSLLKEGSGRG
LCRRIISVVKAANVLGLTFSEAFDKQPIELLQLLSLKAQESFEEAHLLVQTHSMPAASIA
QILAESFLKGLLAAHRGGYMDFQKDEGPAPLLWRISDFLKWAELCPSDSEIGHALMRLVI
TGQEIPHACEVELLILSHHFYKLSACLDGVDVLVALAATRVEAYAWEGDFSCLARLITGV
GNFHALKFILGILIENGQLDILLQKFSAAADVNSGTAEAVRGFRMAVLTSLKQFNPSDLD
AFAMVYNHFDMKHETAALLELRAKQLSQQWFLRYDKDQNEELLESMHYFIEAAEVHSSID
AGNKTRKSCAQASLVSLQIRMPDTKWLNLSETNARRILVEQSRFQEALIVAEAYGLNQPS
EWALVLWEQMLNPELTEQFVAEFVAVLPLQPSMLAELARFYRSEMQARGDQSQFSVWLTG
GGLPADWAKYLGRSFRCLLRRTRDIRLKQHLAASATGFDDIVEASNRELDKVPENAGPLI
LRKGHGGAYLPLM
NT seq
9582 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgattcccgtcctaccgaggatggtctcccagtactgcagttgaggaaatgg
gatccctcagagtttccatatagcccatctagttttcgtgagggttttatatctccaacg
agaaagtcgttgttgttactctcttatgattctgaggcattattgtttcccctagtgaaa
ggtcgatgtataggaaataatgattctgaacttttttctgatgaaatagttgctgatcca
ctagaatcaagtaagcctggtatatcagagccaagggaaagtatctctggctcttctggc
actgtagatttggatgaaaagactggctacacatcaggttcaggagttagtattcaagaa
tctactggtgcttttatatctgatgtagattcagtggcatggggtctatgcagggacaca
tttgatcagcacgagggggcttcattcgaagagctactttttgtctctggaagacaaggg
gtagttgtacatgctttttctaagtttggtaaatttagtggagtaataaaacctgagcaa
gcaagggatgttgggcaagggaagtggatggagtgggggccctcgagaaccttatctcca
gatattgaggttcatgaagaagtagaatctcatgataagatcaccgggaaaagaacttct
gatgcagaagcccctgttagggatggtcggtcagctactccaaagatatggatgcaaacg
tttttgactgaagttgaaagcgtaacatctggtggttacgtttattctaggtacccaaag
atgccattatttccgaatgatgtagttgtttcttttaggatatatgaccaggaatcacca
ttctccgaccccgtgtctcttggtgatacagcaccatgtaatcatacaaatcccagcatg
ccaatcatggtatgcactaccaatagatcagatacagatcttagttcacctgtcacgtca
gttgcaggggatagtgtatctagcttgaaaagtgatgtcactaatggtccgtataagtgc
accaaagttttctctaacaatttgcatcggttagttggctttgctctatccaatactagt
tctacagctgttgatactggcaatttaaatgatggaaactacacgaaaaatctggtttca
gtggccagaactgtgagctggggaatacagtggctatactcagcaaagcttgatgaaaaa
cttgatacaggtccatttgagtggatagacttcaggttttctgatagatttcttatttgt
ctcagtacatctggcacaatctcattgtatggtgcaatgactggtgagtatatagcatct
cttgatgtttttaggagaaatgaacctggctattcttcaagctcttggcaccgtattggt
agtcttaccatcagaagaaagtttaaaaggctctttgtatttcctcattccttattgtta
ggtgtgatggatgaatctggtgtaatctatgctgtacctactgataaccatgtcctcgaa
gaccaattttcatttgaagacgtcctcccttatcaatactattcagatcttggactttta
atgggttgggaggtagggggtgctgagattggataccaaagggtactttctaatacatca
aaggctcatggtattagtagattagcaggttatggtagatattctcagttcattggtaaa
gagaatcttataaaagaaaatagtcatataaaggattcaaagggtaacaatggctcgtat
ctcatgaccttttctaatgcaacccatatgttgaacgagaataagctaatgctttctgat
tttccatcttgccttataagaaaagcttttatacccccttttggatgcagtgaagatgat
gttatctgttgttctcaatttggagttactcgccttactaagagatatagttatgagaag
agacgatgtcaagttgtgcataccaatctacaattagattttaatgtgaatgatgatata
aattatgtcatgcctactggggagacctcttctaatgaagctgttggctgcaatttcaat
gggtgcttatatttgttgaccagaagaggtctctcggttgttcttccttcgatttcagct
accccaaatttctttcctgttgaggcaattggatatcatataccaaattgttctagtagc
ataatgtatggggcaggtgatcttatgggaacaggtagaactaaaaaacccttctcacca
tggaaagtggaggttttggatcgagttcttttatatgaaggccttgaagttgcagaaaag
ttatgcttggaaaatggctgggtattggggatttctcggatccgtcacttgcagttggct
ttggcttaccttgaatttgatgaaattaagaactctctggaagtgcttatgagggttgat
atggcagtggaaggcatcttgaggttgctctttgcagctttttatctgatgttcaataaa
gtaagcaacgatagtgaggtttctgctgcatcaaggcttctagcattggccaccgattat
gcaactagggtcatacgtaaatatggcctattgcatcataagaaagtgtccgagaagcca
ttggaggttagcagtaatgaaggcctttatcctctattggagttgactgaaaaagagcat
gatgaagagggaacttcaagaacccttgctgaagcagcacgatatttggtggttattcgg
agtttgcagcagcagttgaatgaaaaattcagacgaccaggacaagtattgacggttaat
gctggtttggtgaacacagttggtactggtcgattggaggatgattacaagaatccagct
gttctggaggatacttcatcgctgattagatcagatcaaagtggaactgcagctcctacc
tctggaactgaattgagtaatgaagagaaccttgctctgatgcctgtggatacagttggt
gctgatttccaagattttcagaactttgataaggctatcctagtttctgaaggaagcaca
tatggaaaaagaacttctagaatagagaatccaaaagatatgatagcacgttgggagttg
gataatatggacattaaaacggttgtgaatgatgcattgctttctagccgtcttcctcta
gctgtgcttagattgcatctacatcatgtgaacaatttgttacctgacacagaaactcgt
gatacctttaatgatgtccggattgctggaagagcgattgcatatgatttatttgtaaag
ggtgagattgggcttggtacaacaacattgcaaaagcttggggaggatgttgaaacaacc
ttgaaacagttagtttttggaactgtcagaagatctctgcgggtgctagttgcagaagag
atgaaaagatatgcataccttgggccacaggagttaaagatattggaaatgttatcatta
gtagagagggtgtatccttgcaatagtttcttcagtacactagctaccaggagaaagggg
cttaagagaatatctaatgaagaaccacttggggagataagtttgcacctattgcaccca
ctatttgacaatcctgtcatttcatgtggagagattgatggagttgttttgggttcatgg
acgaccattgacaaacattctatcgctgctgaagtagatgatgacaccagccatgctgct
tattgggctgctgctgcagcttggtcagatgcctgggatcaaagagttgttgaccgtata
cttctggaccaacctcttcttatgggtgttaatgtattgtgggaatctcaagttgagtat
catgtatgccataatgactggttagaagtttcaaagctactagaggtagttccaccatat
gcactctctcctggaagccttagcataagcttggatgatatacgtccagcttcatccatt
gagtatggtcaggagccccctgaattcaacaaatactcaagtttccttgatgacttggac
actgtatgcatgaatgtgcaaaacatcagacttttcaggtttcctacaaacaggtcatct
tctgtgtggttaaggaggcttatggagcagcagcttgcaaacaaattaatctttttggtg
gattactgggaccgagtatcagatattgtacctttgctggcccggtcaggttttatgagt
gatttacatgacacttctttcctggatggagcaaatgatggttcatctgagttactggtt
attggtgatgcacctattgatccagatgcaatgcaatctctacataaagttgttgtacat
ttctgcgcccagtataacttactataccttctggacatttatcttgacactcacaaactg
gctattgaccatagttccctttcctttttattggatgcagcaggtgataatgagtgggtt
aagtgcttgctcttaatgagggttaaaggaaaagaatatgatgcatcattttcgaatgct
cgtgcggttgctgctctaaattcagttccaggtaataaacttactgtggagatggatgac
atcgtccaagctgttgatgacattgcagaaggagcaggggaaatggctgctttagccaca
ttgatgtttgctcctgctcctctacaagaatgccttagtagtggcagtgtaaaaagacac
tgtagctctgctcaatgcaccttggagaaccttagaccagcccttcatcggttccctaca
ttatggaacacccttgtagcagcatgttttggtcaagattcgacttgccgcaatctcaag
acaaaaatgtcaggatattctgagttgttagactacttgaactggagagaaggagtattc
ttctcttccctacgagatacttcaattcttcagatgattccatgctggttccctaaggca
gtacggagattggttcagctttatgtgcagggcccagttggttggcaatcattggctgat
tcagagactgaagaactttctcttctaagagacatctattatgttgtaaattcaagtggt
catgctcagattagtgccacatcctgggaagctgtcatccagagacatatagaagaggaa
ctctattcatcttctttagagggagctgatgttggacttgaacaccatttgcatcgtggg
cgtgcattagctgctttaaatcatctcctttcagcaagagtccataaattgaaatctgat
aataagcattgggagcaacctgaatctctatcaactgggcaaacaaatatacaatcggat
gtgcagatccttctttcaccaataactgagagtgaagagtctcttctttcatctgttata
ccccttgctattcagcattttgatgactctgtattggtggcttcatgcgcttttgttttg
gaactatgtggtttatctgctagtactctccgaatggatattgctgccttgaaaagaata
tcttctttctacaagtcggccgagaacaatcagtatatgcaactatctcctaggagccct
gcttttcttcagccgcctgttgaagtagacttaacagaatctatagctagagctctggca
gatgattatcttcataaatattctagtagcataatgcagaaaggtgaccgaaacaatagt
gttttgaatcaaccgtcacgagctttattgcttgttcttcagcacttggaaaaggcaagt
cttccattgccatccaatagcatgacctgtgggtcttggttgtcaagtggaaatggagat
ggagctgagttaaggtctcaacagaaagccgcaagccagcactggcaattggtcacagcc
ttttgtcagatgcataacattcctttgagcactaaatatcttgctgtattagccagggac
aacgactgggttggctttttgtccaaagttcaaattgggaaatatacttttgaaacagta
atgcaactggcatcaaaggagttcagtgacgcctgtttaagatctcacattacaacagtt
ttgcgaagcatgcagtccaggaaaaaaactgcaccattgaatatggatactggagaaaag
gacacaaattatctgtcaaatgagaatctttgcatgcctgtggaattatttggaattata
gcgggatgtgaaagaaatgaaagacctggagaggctcttctcctgaaagcaaagaactta
agctggtcgattctggctatggttgcttcttgctttcctgatgtctccccattgtcctgc
ctgacagtttggctggaaattactgcagcaagggagacttccgccatcaaagttaatgac
attgcatctcaaatttctaaaaatgttggagctgctgttgaggctaccaacgccctttct
cctggtgctagaaccataacatttcgttataataggaaaaacgcgaagcgtaggcgcctt
caggaacctgttccactggatactttgacatcagcagattctataagttctaaaagctcc
actttttctaatactcaaggttttcttcatgaagagggaagtgataaaatagatgataaa
gatgccaagttttggactgactctaatagcatggctaacactctgtcaagaatggtggct
gtcctctgtgagcagcacctgttccttcctctgctaaaagcttttgaaatatttctacct
tcatgctcattgttacctttcatccgtgctcttcaggctttctcacacatgctcctctca
gaggcttcagcacatcttggattattttcaaccataattaaggaagagcctcctcttaca
ctacctaattgggaaagagaagggaaagttgggaactcgtggacaacttcgactgctgtc
aaagctgctgatgccatccttttaacttgcccatccccatacgagaaaagatgcttgcta
aggctccttgctgctaccgactttggtgatggagggtctattgccgcacgatatggccaa
ttgtcttggaaaatagatatggctgaaccctatatgaggggtgatgaatgccccctcctt
ggaaatgaaacgtttgatgatgcttcacttctatctgcattggaaaagaatgggtattgg
gaacaagcacgctgttgggcaaagaagttggaggccagtggtgaatcacgttggaaatct
gcagccaatcatgtaactgaaatgcaggcggaagccatggttgcagagtggaaggaattt
ctttggtatatcccagaagagagggttgctttgtggagccactgccagacacttttcatc
agatattccttcccagcattgcaggcaggacaattcttcttaaaacatgctgaagctgtg
gaaaaagatatttcagcaaaagaacttcatgagattttgctacttgctctgcagtggttg
agtggaatgacaactttgtcaaacccggtttatccaccacaccttctacgcgaaattgaa
actagagtgtggctcttagctgtggaatcagaagctctggtaaagaatgaaggtgatgtg
aattcattaatttcatctgcccgggagcctggagctggcaagagttctgatttaatggac
cgtacagcaagcattgttgcaaaaatggataatcatatgaatggacttaggctcaaatct
tctgagagaaatgatagagaaaatggtcagcctcatgttaggatgactcaaactggcgac
ggcggcttaaagacaaaaaggagagcaaaaggctttgcatcaagaaaacctttgtttgat
tcaggagacaaaaagtatgactctgaatctatacctctcaaccctagagatgagacacat
ttagttgatgaaagttcaaaaattgatgcctcgttatcgaggtgggaggaaagagttgga
cctgctgagctcaatagagctgttctttcactgttagactttggacacataacagctgct
agacaactgcagaataaactttctccagacaacatgccatctgaattttttattgttgat
gcggctttgaagcttgctgctcattcaacttcaagcatgaaggtgtcaatgccaatgttg
gatggtgatgtatcctctgttatgcagtcatgcaatcttctgactgagcagcaagtgatt
gatcccctgcagaccctggagagtttcccaagtcttcttaaggagggtagtggacgtggc
ctatgcaggaggataatctctgttgttaaagctgcaaatgtgcttggtttaacattttca
gaggcattcgacaaacagccaatagagctgctgcaattgctatctctcaaagcgcaagag
tcttttgaggaagcccatcttttagttcaaacacactcaatgccagctgctagtattgcc
caaattctcgccgaatcatttctaaagggtctattagcagcacaccgtgggggttatatg
gattttcagaaggatgaaggacctgctccactgctatggagaatttcggacttcctaaaa
tgggctgagctttgtccttctgattcagaaattggccatgcattaatgagactagtaatc
acagggcaagaaataccccacgcgtgcgaggttgagcttctcattctatcccatcacttc
tataagttgtcagcatgccttgatggtgttgatgtgctcgtagctcttgctgcaaccagg
gtagaagcttatgcctgggagggtgatttctcgtgtcttgcgcgcttgataacaggagtt
ggaaacttccatgctcttaagttcatacttgggatactgatcgagaatggccaactggat
atcctccttcaaaaattttcagcagctgctgatgtcaacagtggaactgctgaggcggtt
aggggatttcgaatggctgttctgacatcactcaagcaatttaacccaagtgatctcgat
gcatttgccatggtctataatcactttgacatgaagcatgaaaccgctgcgcttttggag
ttgcgtgcaaaacaattatctcaacagtggtttcttcgttacgacaaggatcaaaatgaa
gagctccttgaatccatgcattatttcattgaggctgcagaagtgcactcctccattgat
gctggcaacaaaactcgcaaatcttgtgctcaggcatcacttgtatcactgcagatacga
atgccagacacaaaatggctcaatctttccgaaactaatgcacggagaatattagtagaa
caatctcggtttcaagaggccttaatagttgctgaagcttacggcctcaaccagccaagt
gagtgggctctggttctctgggagcagatgctcaaccccgagctcactgaacagtttgta
gctgagtttgtcgctgtactacctctccagccttcaatgctagctgaacttgcaagattc
tatcggtccgagatgcaagcccgcggagaccagtcccagttctcagtgtggctcactgga
ggaggcctgccggcagactgggcaaagtatctcggtagatcattcagatgcttgctgagg
cggacaagagacatcaggttgaaacaacatctggctgcctcagccactggatttgatgac
atcgtcgaagcatccaacagggaactggacaaggtcccggaaaacgcaggaccccttatc
ctgaggaaaggacatggaggggcgtacctccctctgatgtag
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integrated database retrieval system
